10 homologs were found in PanDaTox collection
for query gene Lferr_1683 on replicon NC_011206
Organism: Acidithiobacillus ferrooxidans ATCC 53993



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011206  Lferr_1683  hypothetical protein  100 
 
 
274 aa  569  1e-161  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  0.187781  normal 
 
 
-
 
NC_011761  AFE_2018  hypothetical protein  100 
 
 
274 aa  569  1e-161  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  0.259755  n/a   
 
 
-
 
NC_013131  Caci_1283  protein of unknown function DUF74  59.22 
 
 
277 aa  301  9e-81  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_1416  hypothetical protein  53.41 
 
 
275 aa  273  2.0000000000000002e-72  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.265711  normal  0.0385868 
 
 
-
 
NC_013124  Afer_0296  protein of unknown function DUF74  52.73 
 
 
290 aa  260  1e-68  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  0.157183  n/a   
 
 
-
 
NC_009565  TBFG_11788  hypothetical protein  44.28 
 
 
262 aa  228  6e-59  Mycobacterium tuberculosis F11  Bacteria  hitchhiker  5.9814e-41  hitchhiker  0.00000283904 
 
 
-
 
NC_013131  Caci_1282  hypothetical protein  32.77 
 
 
299 aa  116  5e-25  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_011206  Lferr_1684  hypothetical protein  30.26 
 
 
325 aa  62.8  0.000000005  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  0.275984  normal 
 
 
-
 
NC_011761  AFE_2019  hypothetical protein  30.26 
 
 
325 aa  62.8  0.000000005  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  unclonable  0.00266391  n/a   
 
 
-
 
NC_009975  MmarC6_1828  hypothetical protein  38.1 
 
 
112 aa  42  0.01  Methanococcus maripaludis C6  Archaea  normal  n/a   
 
 
-
 
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