15 homologs were found in PanDaTox collection
for query gene Lferr_1288 on replicon NC_011206
Organism: Acidithiobacillus ferrooxidans ATCC 53993



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_011206  Lferr_1288  hypothetical protein  100 
 
 		 82 aa  169  1e-41  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  0.814149  unclonable  0.0000000000204533 
 
 
-
 
NC_011206  Lferr_0228  N-6 DNA methylase  97.92 
 
 		 484 aa  98.6  3e-20  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011761  AFE_1577  type I restriction-modification system, M subunit  95.83 
 
 		 484 aa  96.3  1e-19  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  0.947149  n/a   
 
 
-
 
NC_014148  Plim_2651  Site-specific DNA-methyltransferase (adenine- specific)  91.67 
 
 		 484 aa  94.4  5e-19  Planctomyces limnophilus DSM 3776  Bacteria  normal  0.0553747  n/a   
 
 
-
 
NC_011146  Gbem_3570  N-6 DNA methylase  89.58 
 
 		 484 aa  92.8  1e-18  Geobacter bemidjiensis Bem  Bacteria  normal  0.054861  n/a   
 
 
-
 
NC_013422  Hneap_0613  Site-specific DNA-methyltransferase (adenine-specific)  87.5 
 
 		 484 aa  90.1  9e-18  Halothiobacillus neapolitanus c2  Bacteria  normal  1  n/a   
 
 
-
 
NC_011145  AnaeK_1535  N-6 DNA methylase  81.25 
 
 		 486 aa  85.9  2e-16  Anaeromyxobacter sp. K  Bacteria  normal  1  n/a   
 
 
-
 
NC_007514  Cag_0807  DNA-methyltransferase, type I restriction-modification enzyme subunit M  83.33 
 
 		 486 aa  83.2  0.000000000000001  Chlorobium chlorochromatii CaD3  Bacteria  normal  0.444408  n/a   
 
 
-
 
NC_013889  TK90_1634  N-6 DNA methylase  79.17 
 
 		 495 aa  80.1  0.00000000000001  Thioalkalivibrio sp. K90mix  Bacteria  normal  0.145722  normal  1 
 
 
-
 
NC_011899  Hore_20220  N-6 DNA methylase  39.58 
 
 		 484 aa  41.6  0.004  Halothermothrix orenii H 168  Bacteria  normal  0.644983  n/a   
 
 
-
 
NC_009338  Mflv_0805  N-6 DNA methylase  31.15 
 
 		 484 aa  40.4  0.007  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.614419  normal  1 
 
 
-
 
NC_009654  Mmwyl1_3200  N-6 DNA methylase  36.07 
 
 		 545 aa  40.8  0.007  Marinomonas sp. MWYL1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011004  Rpal_1501  N-6 DNA methylase  35.42 
 
 		 513 aa  40.4  0.007  Rhodopseudomonas palustris TIE-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009483  Gura_2095  N-6 DNA methylase  36.73 
 
 		 506 aa  40.4  0.009  Geobacter uraniireducens Rf4  Bacteria  normal  0.866989  n/a   
 
 
-
 
NC_011668  Sbal223_4455  N-6 DNA methylase  40.48 
 
 		 492 aa  40  0.01  Shewanella baltica OS223  Bacteria  normal  0.435107  normal  1 
 
 
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