8 homologs were found in PanDaTox collection
for query gene Lcho_2636 on replicon NC_010524
Organism: Leptothrix cholodnii SP-6



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010524  Lcho_2636  hypothetical protein  100 
 
 
240 aa  475  1e-133  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_007520  Tcr_0046  hypothetical protein  38.43 
 
 
242 aa  156  4e-37  Thiomicrospira crunogena XCL-2  Bacteria  hitchhiker  0.000000000325595  n/a   
 
 
-
 
NC_011146  Gbem_3687  hypothetical protein  37.65 
 
 
245 aa  153  2e-36  Geobacter bemidjiensis Bem  Bacteria  hitchhiker  0.00000326196  n/a   
 
 
-
 
NC_012918  GM21_3782  hypothetical protein  37.3 
 
 
250 aa  149  4e-35  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_009483  Gura_4033  hypothetical protein  37.8 
 
 
250 aa  147  2.0000000000000003e-34  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.00000000737257  n/a   
 
 
-
 
NC_009675  Anae109_0979  hypothetical protein  29.41 
 
 
339 aa  60.8  0.00000002  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.18823  normal 
 
 
-
 
NC_013440  Hoch_6470  hypothetical protein  28.31 
 
 
324 aa  60.5  0.00000002  Haliangium ochraceum DSM 14365  Bacteria  normal  normal 
 
 
-
 
NC_010644  Emin_1270  hypothetical protein  25.91 
 
 
240 aa  43.1  0.004  Elusimicrobium minutum Pei191  Bacteria  hitchhiker  0.000239047  normal 
 
 
-
 
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