13 homologs were found in PanDaTox collection
for query gene LGAS_1644 on replicon NC_008530
Organism: Lactobacillus gasseri ATCC 33323



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008530  LGAS_1644  DNA-entry nuclease  100 
 
 
282 aa  567  1e-161  Lactobacillus gasseri ATCC 33323  Bacteria  hitchhiker  0.0000177667  normal 
 
 
-
 
NC_008530  LGAS_0842  DNA-entry nuclease  32.59 
 
 
283 aa  99  7e-20  Lactobacillus gasseri ATCC 33323  Bacteria  hitchhiker  0.0000703488  normal 
 
 
-
 
NC_013165  Shel_06680  hypothetical protein  28.57 
 
 
337 aa  84  0.000000000000003  Slackia heliotrinireducens DSM 20476  Bacteria  unclonable  0.00000220571  normal 
 
 
-
 
NC_008531  LEUM_0298  DNA-entry nuclease  25.82 
 
 
289 aa  77  0.0000000000003  Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293  Bacteria  normal  0.0462344  n/a   
 
 
-
 
NC_004116  SAG0686  DNA-entry nuclease, putative  30.04 
 
 
261 aa  72  0.00000000001  Streptococcus agalactiae 2603V/R  Bacteria  unclonable  0.0000269759  n/a   
 
 
-
 
NC_008531  LEUM_1059  DNA-entry nuclease  30.14 
 
 
261 aa  72  0.00000000001  Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293  Bacteria  normal  0.711207  n/a   
 
 
-
 
NC_008532  STER_1121  competence associated membrane nuclease  28.87 
 
 
293 aa  71.6  0.00000000001  Streptococcus thermophilus LMD-9  Bacteria  decreased coverage  0.000833085  n/a   
 
 
-
 
NC_004116  SAG0868  DNA-entry nuclease  31.76 
 
 
285 aa  70.9  0.00000000002  Streptococcus agalactiae 2603V/R  Bacteria  normal  0.0114496  n/a   
 
 
-
 
NC_009513  Lreu_0961  DNA/RNA non-specific endonuclease  32.52 
 
 
284 aa  68.9  0.00000000009  Lactobacillus reuteri DSM 20016  Bacteria  unclonable  0.000000000000233134  n/a   
 
 
-
 
NC_008531  LEUM_1261  DNA-entry nuclease  29.28 
 
 
265 aa  66.6  0.0000000004  Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293  Bacteria  normal  0.124263  n/a   
 
 
-
 
NC_013170  Ccur_08080  DNA/RNA non-specific endonuclease  28.5 
 
 
303 aa  57  0.0000003  Cryptobacterium curtum DSM 15641  Bacteria  normal  0.0701644  normal  0.440948 
 
 
-
 
NC_008531  LEUM_0743  DNA-entry nuclease  29.23 
 
 
391 aa  48.9  0.00008  Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293  Bacteria  normal  n/a   
 
 
-
 
NC_008527  LACR_0163  DNA-entry nuclease  25.79 
 
 
250 aa  42.7  0.007  Lactococcus lactis subsp. cremoris SK11  Bacteria  normal  n/a   
 
 
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