11 homologs were found in PanDaTox collection
for query gene LGAS_0839 on replicon NC_008530
Organism: Lactobacillus gasseri ATCC 33323



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008530  LGAS_0839  small membrane protein  100 
 
 
93 aa  189  8e-48  Lactobacillus gasseri ATCC 33323  Bacteria  hitchhiker  0.0000265054  normal 
 
 
-
 
NC_009513  Lreu_0177  hypothetical protein  57.65 
 
 
106 aa  117  3.9999999999999996e-26  Lactobacillus reuteri DSM 20016  Bacteria  normal  n/a   
 
 
-
 
NC_008531  LEUM_1328  small membrane protein  60.81 
 
 
86 aa  102  1e-21  Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293  Bacteria  normal  n/a   
 
 
-
 
NC_002967  TDE2529  hypothetical protein  54.12 
 
 
86 aa  97.4  5e-20  Treponema denticola ATCC 35405  Bacteria  normal  0.0566491  n/a   
 
 
-
 
NC_013170  Ccur_10250  hypothetical protein  50 
 
 
85 aa  96.3  1e-19  Cryptobacterium curtum DSM 15641  Bacteria  normal  0.683516  normal  0.185712 
 
 
-
 
NC_009802  CCC13826_2193  hypothetical protein  55.42 
 
 
85 aa  95.9  2e-19  Campylobacter concisus 13826  Bacteria  normal  0.247542  n/a   
 
 
-
 
NC_013162  Coch_0732  hypothetical protein  56.41 
 
 
87 aa  95.1  3e-19  Capnocytophaga ochracea DSM 7271  Bacteria  normal  n/a   
 
 
-
 
NC_013162  Coch_1923  integral membrane protein  49.46 
 
 
92 aa  85.5  2e-16  Capnocytophaga ochracea DSM 7271  Bacteria  normal  0.192633  n/a   
 
 
-
 
NC_013203  Apar_0045  hypothetical protein  48.75 
 
 
87 aa  84  6e-16  Atopobium parvulum DSM 20469  Bacteria  normal  normal 
 
 
-
 
NC_008531  LEUM_1449  small membrane protein  40.96 
 
 
104 aa  77.8  0.00000000000005  Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293  Bacteria  unclonable  0.000000657535  n/a   
 
 
-
 
NC_010725  Mpop_4217  hypothetical protein  50.65 
 
 
98 aa  77.4  0.00000000000007  Methylobacterium populi BJ001  Bacteria  normal  normal 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>