115 homologs were found in PanDaTox collection
for query gene LEUM_2004 on replicon NC_008531
Organism: Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008531  LEUM_2004  transcriptional regulator  100 
 
 
142 aa  278  1e-74  Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293  Bacteria  normal  0.112591  n/a   
 
 
-
 
NC_013132  Cpin_2651  transcriptional regulator, MarR family  38.3 
 
 
143 aa  101  3e-21  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.512568  normal 
 
 
-
 
NC_013595  Sros_2753  MarR family transcriptional regulator  33.33 
 
 
299 aa  91.7  3e-18  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.0669 
 
 
-
 
NC_013947  Snas_3717  transcriptional regulator, MarR family with acetyltransferase activity  38.98 
 
 
310 aa  88.6  3e-17  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.554507  normal  0.112952 
 
 
-
 
NC_007492  Pfl01_2408  MarR family transcriptional regulator  34.07 
 
 
305 aa  87.4  6e-17  Pseudomonas fluorescens Pf0-1  Bacteria  normal  hitchhiker  0.00944596 
 
 
-
 
NC_008254  Meso_2109  MarR family transcriptional regulator  33.09 
 
 
314 aa  84.7  4e-16  Chelativorans sp. BNC1  Bacteria  normal  0.67396  n/a   
 
 
-
 
NC_011894  Mnod_6358  transcriptional regulator, MarR family with acetyltransferase activity  29.5 
 
 
326 aa  83.2  0.000000000000001  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.788549  n/a   
 
 
-
 
NC_011369  Rleg2_2507  transcriptional regulator, MarR family with acetyltransferase activity  33.33 
 
 
305 aa  82.4  0.000000000000002  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_012850  Rleg_2761  transcriptional regulator, MarR family with acetyltransferase activity  32.62 
 
 
305 aa  82  0.000000000000002  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.690582  normal  0.688792 
 
 
-
 
NC_007778  RPB_1078  MarR family transcriptional regulator  31.85 
 
 
307 aa  81.6  0.000000000000004  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.273595 
 
 
-
 
NC_010511  M446_5167  MarR family transcriptional regulator  28.78 
 
 
314 aa  80.9  0.000000000000005  Methylobacterium sp. 4-46  Bacteria  normal  0.0893639  normal  0.0785126 
 
 
-
 
NC_013132  Cpin_3649  transcriptional regulator, MarR family with acetyltransferase activity  29.08 
 
 
311 aa  79  0.00000000000002  Chitinophaga pinensis DSM 2588  Bacteria  hitchhiker  0.00196269  normal  0.251982 
 
 
-
 
NC_011004  Rpal_1223  transcriptional regulator, MarR family with acetyltransferase activity  27.94 
 
 
312 aa  79.3  0.00000000000002  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_4364  MarR family transcriptional regulator  27.74 
 
 
308 aa  77.4  0.00000000000007  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.258723  normal  0.018546 
 
 
-
 
NC_009441  Fjoh_2015  GCN5-related N-acetyltransferase  38.68 
 
 
306 aa  75.9  0.0000000000002  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_009484  Acry_0978  MarR family transcriptional regulator  28.33 
 
 
310 aa  75.9  0.0000000000002  Acidiphilium cryptum JF-5  Bacteria  normal  0.154037  n/a   
 
 
-
 
NC_009667  Oant_1080  GCN5-related N-acetyltransferase  30 
 
 
309 aa  72.8  0.000000000001  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.48831  n/a   
 
 
-
 
NC_007951  Bxe_A4157  MarR family transcriptional regulator  31.3 
 
 
308 aa  71.2  0.000000000005  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.963186 
 
 
-
 
NC_008688  Pden_4525  MarR family transcriptional regulator  27.54 
 
 
315 aa  71.2  0.000000000005  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_012791  Vapar_2224  transcriptional regulator, MarR family with acetyltransferase activity  27.74 
 
 
320 aa  71.2  0.000000000005  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_010681  Bphyt_0559  transcriptional regulator, MarR family with acetyltransferase activity  31.58 
 
 
308 aa  70.5  0.000000000008  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.380948 
 
 
-
 
NC_008009  Acid345_3457  MarR family transcriptional regulator  27.94 
 
 
310 aa  69.7  0.00000000001  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.965318  hitchhiker  0.0098073 
 
 
-
 
NC_011071  Smal_1052  transcriptional regulator, MarR family with acetyltransferase activity  28.78 
 
 
304 aa  69.7  0.00000000001  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.0668577  normal  0.704803 
 
 
-
 
NC_007948  Bpro_3019  MarR family transcriptional regulator  32.38 
 
 
316 aa  69.3  0.00000000002  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_2336  MarR family transcriptional regulator  27.74 
 
 
309 aa  68.9  0.00000000002  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_2134  transcriptional regulator, MarR family with acetyltransferase activity  27.34 
 
 
322 aa  68.2  0.00000000004  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_010622  Bphy_0291  MarR family transcriptional regulator  26.95 
 
 
307 aa  65.5  0.0000000002  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_014158  Tpau_2501  transcriptional regulator, MarR family with acetyltransferase activity  31.97 
 
 
289 aa  60.5  0.000000009  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_010725  Mpop_2115  transcriptional regulator, MarR family with acetyltransferase activity  37.84 
 
 
317 aa  58.2  0.00000004  Methylobacterium populi BJ001  Bacteria  normal  normal 
 
 
-
 
NC_012880  Dd703_2189  transcriptional regulator, MarR family with acetyltransferase activity  29.41 
 
 
325 aa  56.6  0.0000001  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_010505  Mrad2831_0971  MarR family transcriptional regulator  28.81 
 
 
291 aa  55.1  0.0000003  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_004347  SO_0916  MarR family transcriptional regulator  26.12 
 
 
309 aa  53.9  0.0000007  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_008321  Shewmr4_0758  MarR family transcriptional regulator  24.26 
 
 
340 aa  52.4  0.000002  Shewanella sp. MR-4  Bacteria  normal  0.575912  normal 
 
 
-
 
NC_008322  Shewmr7_3265  MarR family transcriptional regulator  24.26 
 
 
326 aa  52.4  0.000002  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_3368  MarR family transcriptional regulator  24.26 
 
 
340 aa  52.4  0.000002  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_009952  Dshi_0779  transcriptional regulator  27.27 
 
 
318 aa  52  0.000003  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.119696  normal  0.0560901 
 
 
-
 
NC_010511  M446_1745  MarR family transcriptional regulator  27.56 
 
 
291 aa  52  0.000003  Methylobacterium sp. 4-46  Bacteria  normal  0.550965  normal 
 
 
-
 
NC_013204  Elen_3108  transcriptional regulator, MarR family  35.05 
 
 
151 aa  51.6  0.000004  Eggerthella lenta DSM 2243  Bacteria  normal  hitchhiker  0.0000159127 
 
 
-
 
NC_011369  Rleg2_2226  transcriptional regulator, MarR family with acetyltransferase activity  30.7 
 
 
291 aa  51.6  0.000004  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.326568  normal 
 
 
-
 
NC_010676  Bphyt_5083  transcriptional regulator, MarR family with acetyltransferase activity  30.58 
 
 
294 aa  50.8  0.000006  Burkholderia phytofirmans PsJN  Bacteria  normal  0.569191  normal  0.0231786 
 
 
-
 
NC_011071  Smal_3618  transcriptional regulator, MarR family  25.23 
 
 
167 aa  50.8  0.000006  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal 
 
 
-
 
NC_011772  BCG9842_B4303  transcriptional regulator, MarR family  28.68 
 
 
152 aa  49.7  0.00001  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_008700  Sama_2775  putative acetyltransferase  26.92 
 
 
312 aa  49.3  0.00002  Shewanella amazonensis SB2B  Bacteria  normal  0.22239  normal 
 
 
-
 
NC_009485  BBta_2718  transcriptional regulator  28.12 
 
 
290 aa  48.9  0.00003  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_011887  Mnod_8209  transcriptional regulator, MarR family with acetyltransferase activity  28.8 
 
 
291 aa  48.1  0.00004  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_005707  BCE_A0172  transcriptional regulator, MarR family protein  26.83 
 
 
151 aa  47.4  0.00006  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_011777  BCAH820_B0290  transcriptional regulator, MarR family protein  26.83 
 
 
151 aa  47.4  0.00006  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_012850  Rleg_2529  transcriptional regulator, MarR family with acetyltransferase activity  28.95 
 
 
291 aa  47.4  0.00006  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_007413  Ava_2813  MarR family transcriptional regulator  25.45 
 
 
160 aa  47  0.00008  Anabaena variabilis ATCC 29413  Bacteria  normal  0.0313232  normal  0.34427 
 
 
-
 
NC_007951  Bxe_A2624  MarR family transcriptional regulator  26.32 
 
 
166 aa  46.6  0.0001  Burkholderia xenovorans LB400  Bacteria  hitchhiker  0.000470188  normal 
 
 
-
 
NC_007951  Bxe_A4529  MarR family transcriptional regulator  26.32 
 
 
166 aa  46.6  0.0001  Burkholderia xenovorans LB400  Bacteria  hitchhiker  0.000000513075  normal 
 
 
-
 
NC_009832  Spro_1391  MarR family transcriptional regulator  27.34 
 
 
307 aa  46.6  0.0001  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_5296  MarR family transcriptional regulator  24.76 
 
 
337 aa  46.2  0.0001  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_009052  Sbal_0762  MarR family transcriptional regulator  24.6 
 
 
347 aa  45.8  0.0002  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009665  Shew185_3555  MarR family transcriptional regulator  24.6 
 
 
349 aa  45.8  0.0002  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_4525  transcriptional regulator, MarR family  26.27 
 
 
165 aa  45.8  0.0002  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_011663  Sbal223_3486  transcriptional regulator, MarR family with acetyltransferase activity  24.6 
 
 
349 aa  45.8  0.0002  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_007512  Plut_1577  MarR family transcriptional regulator  26.09 
 
 
170 aa  45.4  0.0003  Chlorobium luteolum DSM 273  Bacteria  normal  normal  0.0137513 
 
 
-
 
NC_009832  Spro_2471  MarR family transcriptional regulator  25 
 
 
321 aa  45.4  0.0003  Serratia proteamaculans 568  Bacteria  normal  0.536093  normal 
 
 
-
 
NC_013132  Cpin_4279  transcriptional regulator, MarR family  31.08 
 
 
161 aa  45.4  0.0003  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal  0.0560787 
 
 
-
 
NC_010625  Bphy_6607  MarR family transcriptional regulator  29.59 
 
 
329 aa  45.1  0.0003  Burkholderia phymatum STM815  Bacteria  normal  0.542838  normal 
 
 
-
 
NC_003295  RSc1295  putative transcription regulator protein  35.8 
 
 
147 aa  45.1  0.0004  Ralstonia solanacearum GMI1000  Bacteria  normal  0.260048  normal 
 
 
-
 
NC_008347  Mmar10_2856  MarR family transcriptional regulator  23.53 
 
 
201 aa  45.1  0.0004  Maricaulis maris MCS10  Bacteria  normal  normal  0.843332 
 
 
-
 
NC_008527  LACR_1629  transcriptional regulator  29.07 
 
 
148 aa  44.7  0.0004  Lactococcus lactis subsp. cremoris SK11  Bacteria  hitchhiker  0.000386217  n/a   
 
 
-
 
NC_009438  Sputcn32_0858  MarR family transcriptional regulator  28.87 
 
 
320 aa  44.7  0.0004  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009504  BOV_A0830  MarR family transcriptional regulator  24.81 
 
 
151 aa  44.3  0.0005  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_003296  RS01785  transcription regulator protein  21.17 
 
 
158 aa  43.9  0.0008  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_009997  Sbal195_3677  MarR family transcriptional regulator  24.6 
 
 
347 aa  43.9  0.0008  Shewanella baltica OS195  Bacteria  normal  normal  0.164477 
 
 
-
 
NC_010511  M446_4993  MarR family transcriptional regulator  24.21 
 
 
169 aa  43.5  0.0009  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_008228  Patl_1122  MarR family transcriptional regulator  25.36 
 
 
151 aa  43.5  0.001  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_0737  MarR family transcriptional regulator  20.86 
 
 
322 aa  43.5  0.001  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_008390  Bamb_1388  MarR family transcriptional regulator  30.43 
 
 
164 aa  42.4  0.002  Burkholderia ambifaria AMMD  Bacteria  normal  n/a   
 
 
-
 
NC_009667  Oant_1107  MarR family transcriptional regulator  28.16 
 
 
145 aa  42.4  0.002  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_009901  Spea_0769  MarR family transcriptional regulator  26.23 
 
 
313 aa  42.7  0.002  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_010087  Bmul_6026  MarR family transcriptional regulator  25.69 
 
 
325 aa  42.7  0.002  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_010338  Caul_4858  MarR family transcriptional regulator  31.63 
 
 
195 aa  42.7  0.002  Caulobacter sp. K31  Bacteria  normal  0.375603  normal 
 
 
-
 
NC_010551  BamMC406_1428  MarR family transcriptional regulator  30.43 
 
 
164 aa  42.4  0.002  Burkholderia ambifaria MC40-6  Bacteria  normal  normal  0.256408 
 
 
-
 
NC_012803  Mlut_21070  transcriptional regulator  26.83 
 
 
143 aa  42.4  0.002  Micrococcus luteus NCTC 2665  Bacteria  normal  n/a   
 
 
-
 
NC_014165  Tbis_0121  MarR family transcriptional regulator  28.81 
 
 
169 aa  42  0.003  Thermobispora bispora DSM 43833  Bacteria  normal  0.273573  normal 
 
 
-
 
NC_013205  Aaci_0649  transcriptional regulator, MarR family  34.88 
 
 
152 aa  42  0.003  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.827556  n/a   
 
 
-
 
NC_007347  Reut_A2508  MarR family transcriptional regulator  25.27 
 
 
158 aa  42  0.003  Ralstonia eutropha JMP134  Bacteria  normal  0.132261  n/a   
 
 
-
 
NC_007951  Bxe_A4061  MarR family transcriptional regulator  22.03 
 
 
170 aa  42  0.003  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.862741 
 
 
-
 
NC_008554  Sfum_3423  MarR family transcriptional regulator  21.9 
 
 
151 aa  42  0.003  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  hitchhiker  0.000118628 
 
 
-
 
NC_009831  Ssed_0856  MarR family transcriptional regulator  25.62 
 
 
352 aa  42  0.003  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_013522  Taci_0498  transcriptional regulator, MarR family  25.81 
 
 
160 aa  42  0.003  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  decreased coverage  0.0000000167628  n/a   
 
 
-
 
NC_012912  Dd1591_1722  transcriptional regulator SlyA  23.94 
 
 
145 aa  42  0.003  Dickeya zeae Ech1591  Bacteria  decreased coverage  0.00118206  n/a   
 
 
-
 
NC_013456  VEA_002424  transcriptional regulator MarR family/GCN5-related N-acetyltransferase  27.47 
 
 
301 aa  41.6  0.004  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_2629  MarR family transcriptional regulator  27.18 
 
 
160 aa  41.6  0.004  Pseudomonas mendocina ymp  Bacteria  normal  0.8863  normal 
 
 
-
 
NC_006349  BMAA0304  MarR family transcriptional regulator  29.21 
 
 
150 aa  41.2  0.005  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_007435  BURPS1710b_A0862  MarR family transcriptional regulator  29.21 
 
 
158 aa  41.2  0.005  Burkholderia pseudomallei 1710b  Bacteria  normal  0.182256  n/a   
 
 
-
 
NC_007650  BTH_II0598  MarR family transcriptional regulator  29.21 
 
 
267 aa  41.2  0.005  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_008527  LACR_0453  transcriptional regulator  27.37 
 
 
166 aa  41.2  0.005  Lactococcus lactis subsp. cremoris SK11  Bacteria  hitchhiker  0.0000992665  n/a   
 
 
-
 
NC_008784  BMASAVP1_1483  MarR family transcriptional regulator  29.21 
 
 
150 aa  41.2  0.005  Burkholderia mallei SAVP1  Bacteria  normal  0.553037  n/a   
 
 
-
 
NC_008835  BMA10229_1679  MarR family transcriptional regulator  29.21 
 
 
150 aa  41.2  0.005  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_009075  BURPS668_A2559  transcriptional regulator  29.21 
 
 
150 aa  41.2  0.005  Burkholderia pseudomallei 668  Bacteria  normal  0.970675  n/a   
 
 
-
 
NC_009078  BURPS1106A_A2422  MarR family transcriptional regulator  29.21 
 
 
150 aa  41.2  0.005  Burkholderia pseudomallei 1106a  Bacteria  normal  0.934023  n/a   
 
 
-
 
NC_009079  BMA10247_A0335  MarR family transcriptional regulator  29.21 
 
 
158 aa  41.2  0.005  Burkholderia mallei NCTC 10247  Bacteria  normal  0.663008  n/a   
 
 
-
 
NC_007510  Bcep18194_A4647  MarR family transcriptional regulator  29.35 
 
 
163 aa  40.8  0.006  Burkholderia sp. 383  Bacteria  normal  0.167247  normal  0.261087 
 
 
-
 
NC_008060  Bcen_1026  MarR family transcriptional regulator  29.35 
 
 
163 aa  40.8  0.006  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008542  Bcen2424_1506  MarR family transcriptional regulator  29.35 
 
 
163 aa  40.8  0.006  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
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