25 homologs were found in PanDaTox collection
for query gene LEUM_0009 on replicon NC_008531
Organism: Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008531  LEUM_0009  signal transduction protein  100 
 
 
277 aa  568  1e-161  Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293  Bacteria  normal  n/a   
 
 
-
 
NC_008532  STER_1650  signal transduction protein  33.47 
 
 
446 aa  98.6  1e-19  Streptococcus thermophilus LMD-9  Bacteria  normal  0.660835  n/a   
 
 
-
 
NC_009012  Cthe_1311  signal transduction histidine kinase regulating citrate/malate metabolism  29.07 
 
 
443 aa  87  3e-16  Clostridium thermocellum ATCC 27405  Bacteria  normal  0.766434  n/a   
 
 
-
 
NC_003909  BCE_3043  histidine kinase domain-containing protein  28.14 
 
 
438 aa  80.5  0.00000000000002  Bacillus cereus ATCC 10987  Bacteria  normal  0.795869  n/a   
 
 
-
 
NC_011773  BCAH820_3005  histidine kinase domain protein  28.88 
 
 
406 aa  81.3  0.00000000000002  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.000000219029 
 
 
-
 
NC_005957  BT9727_2744  histidine kinase  28.45 
 
 
438 aa  79.7  0.00000000000004  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  hitchhiker  0.00108764  n/a   
 
 
-
 
NC_006274  BCZK2724  sensor histidine kinase  28.45 
 
 
438 aa  79.7  0.00000000000005  Bacillus cereus E33L  Bacteria  normal  0.276945  n/a   
 
 
-
 
NC_011658  BCAH187_A3042  histidine kinase domain protein  29.79 
 
 
406 aa  79.7  0.00000000000005  Bacillus cereus AH187  Bacteria  hitchhiker  0.00679309  n/a   
 
 
-
 
NC_005945  BAS2795  histidine kinase domain-containing protein  28.45 
 
 
438 aa  77.8  0.0000000000002  Bacillus anthracis str. Sterne  Bacteria  normal  0.921315  n/a   
 
 
-
 
NC_007530  GBAA_3007  histidine kinase domain-containing protein  28.45 
 
 
438 aa  77.8  0.0000000000002  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_008531  LEUM_0094  signal transduction protein  27.4 
 
 
436 aa  74.3  0.000000000002  Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293  Bacteria  normal  0.41097  n/a   
 
 
-
 
NC_002976  SERP1492  accessory gene regulator protein C  24.3 
 
 
429 aa  55.8  0.0000008  Staphylococcus epidermidis RP62A  Bacteria  normal  0.108947  n/a   
 
 
-
 
NC_010424  Daud_0745  signal transduction histidine kinase regulating citrate/malate metabolism  25.35 
 
 
460 aa  53.1  0.000004  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
NC_013216  Dtox_0401  signal transduction histidine kinase regulating citrate/malate metabolism  28.14 
 
 
479 aa  48.9  0.00008  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal 
 
 
-
 
NC_010320  Teth514_0499  signal transduction histidine kinase regulating citrate/malate metabolism  28.89 
 
 
287 aa  46.2  0.0005  Thermoanaerobacter sp. X514  Bacteria  hitchhiker  0.000111074  n/a   
 
 
-
 
NC_013235  Namu_1041  signal transduction histidine kinase regulating citrate/malate metabolism  26.32 
 
 
563 aa  44.3  0.002  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_011353  ECH74115_0707  sensor histidine kinase DpiB  27.45 
 
 
552 aa  43.9  0.003  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  normal 
 
 
-
 
CP001637  EcDH1_3006  signal transduction histidine kinase regulating citrate/malate metabolism  27.45 
 
 
552 aa  43.9  0.003  Escherichia coli DH1  Bacteria  normal  n/a   
 
 
-
 
NC_010498  EcSMS35_0638  sensor histidine kinase DpiB  26.96 
 
 
552 aa  43.9  0.003  Escherichia coli SMS-3-5  Bacteria  normal  0.736103  normal 
 
 
-
 
NC_009801  EcE24377A_0642  sensor histidine kinase DpiB  27.45 
 
 
552 aa  43.9  0.003  Escherichia coli E24377A  Bacteria  normal  0.0459667  n/a   
 
 
-
 
NC_009800  EcHS_A0670  sensor histidine kinase DpiB  27.45 
 
 
552 aa  43.9  0.003  Escherichia coli HS  Bacteria  normal  0.0246714  n/a   
 
 
-
 
NC_002967  TDE0032  histidine kinase-related ATPase, putative  26.58 
 
 
248 aa  43.9  0.003  Treponema denticola ATCC 35405  Bacteria  hitchhiker  0.00000737644  n/a   
 
 
-
 
CP001509  ECD_00589  sensory histidine kinase in two-component regulatory system with citB  27.45 
 
 
552 aa  43.9  0.003  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
NC_008740  Maqu_2898  signal transduction histidine kinase regulating citrate/malate metabolism  24.19 
 
 
553 aa  43.1  0.005  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_010468  EcolC_3025  signal transduction histidine kinase regulating citrate/malate metabolism  27.45 
 
 
552 aa  42  0.01  Escherichia coli ATCC 8739  Bacteria  normal  normal 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>