115 homologs were found in PanDaTox collection
for query gene LACR_1580 on replicon NC_008527
Organism: Lactococcus lactis subsp. cremoris SK11



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008527  LACR_1580  ABC-type sugar transport system, periplasmic component  100 
 
 
544 aa  1119    Lactococcus lactis subsp. cremoris SK11  Bacteria  normal  n/a   
 
 
-
 
NC_013174  Jden_2399  extracellular solute-binding protein family 1  40.62 
 
 
553 aa  425  1e-117  Jonesia denitrificans DSM 20603  Bacteria  hitchhiker  0.000923736  normal 
 
 
-
 
NC_013521  Sked_33170  carbohydrate-binding protein  40.57 
 
 
551 aa  424  1e-117  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.0165973  normal 
 
 
-
 
NC_012669  Bcav_3323  extracellular solute-binding protein family 1  41.06 
 
 
552 aa  421  1e-116  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.175879  normal  0.023879 
 
 
-
 
NC_014151  Cfla_2998  extracellular solute-binding protein family 1  40.73 
 
 
552 aa  414  1e-114  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.58673  normal  0.432395 
 
 
-
 
NC_014165  Tbis_1561  sugar ABC transporter periplasmic component-like protein  39.44 
 
 
553 aa  404  1e-111  Thermobispora bispora DSM 43833  Bacteria  normal  0.129044  normal 
 
 
-
 
NC_013093  Amir_1979  extracellular solute-binding protein family 1  39.34 
 
 
542 aa  397  1e-109  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_3821  extracellular solute-binding protein family 1  41.39 
 
 
553 aa  397  1e-109  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.302994  normal  0.0761262 
 
 
-
 
NC_013530  Xcel_0369  extracellular solute-binding protein family 1  39.03 
 
 
556 aa  387  1e-106  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013530  Xcel_2662  hypothetical protein  34.66 
 
 
557 aa  334  2e-90  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_014151  Cfla_2806  extracellular solute-binding protein family 1  34.79 
 
 
556 aa  317  3e-85  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.636428  normal  0.0208064 
 
 
-
 
NC_013172  Bfae_01630  ABC-type sugar transport system, periplasmic component  32.72 
 
 
557 aa  303  5.000000000000001e-81  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_20480  ABC-type sugar transport system, periplasmic component  34.58 
 
 
559 aa  299  7e-80  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.497394  normal  0.432529 
 
 
-
 
NC_010001  Cphy_2654  sugar ABC transporter substrate-binding protein  29.48 
 
 
586 aa  218  2e-55  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_010001  Cphy_1118  extracellular solute-binding protein  26.43 
 
 
541 aa  157  5.0000000000000005e-37  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.000575789  n/a   
 
 
-
 
NC_012034  Athe_2029  ABC-type sugar transport system periplasmic component-like protein  24.85 
 
 
526 aa  88.2  4e-16  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_010001  Cphy_0487  extracellular solute-binding protein  24.83 
 
 
558 aa  87.8  5e-16  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_008541  Arth_0426  extracellular solute-binding protein  23.06 
 
 
536 aa  85.1  0.000000000000003  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_010001  Cphy_0775  extracellular solute-binding protein  21.16 
 
 
523 aa  77.8  0.0000000000005  Clostridium phytofermentans ISDg  Bacteria  normal  0.062981  n/a   
 
 
-
 
NC_010001  Cphy_3240  extracellular solute-binding protein  23.58 
 
 
522 aa  71.6  0.00000000004  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_010001  Cphy_0395  extracellular solute-binding protein  23.37 
 
 
559 aa  68.2  0.0000000004  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_013515  Smon_0123  extracellular solute-binding protein family 1  19.91 
 
 
505 aa  67.4  0.0000000006  Streptobacillus moniliformis DSM 12112  Bacteria  n/a    n/a   
 
 
-
 
NC_014165  Tbis_1105  extracellular solute-binding protein family 1  26.4 
 
 
443 aa  67.4  0.0000000006  Thermobispora bispora DSM 43833  Bacteria  normal  0.698754  normal  0.0706181 
 
 
-
 
NC_013525  Tter_1101  extracellular solute-binding protein family 1  20.94 
 
 
567 aa  67.4  0.0000000007  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_013172  Bfae_13590  ABC-type sugar transport system, periplasmic component  22.25 
 
 
552 aa  66.6  0.000000001  Brachybacterium faecium DSM 4810  Bacteria  normal  0.080698  n/a   
 
 
-
 
NC_013172  Bfae_17890  ABC-type sugar transport system, periplasmic component  21.14 
 
 
527 aa  66.2  0.000000001  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013530  Xcel_2784  extracellular solute-binding protein family 1  24.58 
 
 
573 aa  66.6  0.000000001  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_011898  Ccel_0948  extracellular solute-binding protein family 1  25.31 
 
 
525 aa  64.3  0.000000005  Clostridium cellulolyticum H10  Bacteria  hitchhiker  0.000245196  n/a   
 
 
-
 
NC_013946  Mrub_0279  extracellular solute-binding protein family 1  19.91 
 
 
510 aa  63.2  0.00000001  Meiothermus ruber DSM 1279  Bacteria  normal  0.795384  normal 
 
 
-
 
NC_012034  Athe_2378  extracellular solute-binding protein family 1  24.52 
 
 
486 aa  62.4  0.00000002  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_3388  extracellular solute-binding protein family 1  24.79 
 
 
547 aa  61.2  0.00000005  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_011899  Hore_09490  extracellular solute-binding protein family 1  32.6 
 
 
424 aa  60.5  0.00000007  Halothermothrix orenii H 168  Bacteria  unclonable  2.48456e-16  n/a   
 
 
-
 
NC_012034  Athe_2330  extracellular solute-binding protein family 1  23.39 
 
 
533 aa  59.3  0.0000002  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_010001  Cphy_3210  putative multiple sugar transport system substrate-binding protein  22.57 
 
 
569 aa  58.5  0.0000003  Clostridium phytofermentans ISDg  Bacteria  decreased coverage  0.000204614  n/a   
 
 
-
 
NC_012850  Rleg_3910  extracellular solute-binding protein family 1  24.86 
 
 
412 aa  58.5  0.0000003  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.198843 
 
 
-
 
NC_013131  Caci_5099  extracellular solute-binding protein family 1  27.72 
 
 
444 aa  58.5  0.0000003  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.291523  normal  0.0224239 
 
 
-
 
NC_011898  Ccel_1016  extracellular solute-binding protein family 1  24.63 
 
 
585 aa  56.2  0.000001  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_012034  Athe_2554  extracellular solute-binding protein family 1  22.93 
 
 
548 aa  56.6  0.000001  Anaerocellum thermophilum DSM 6725  Bacteria  hitchhiker  0.00103966  n/a   
 
 
-
 
NC_013093  Amir_1927  extracellular solute-binding protein family 1  27.51 
 
 
439 aa  56.6  0.000001  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_2709  extracellular solute-binding protein family 1  22.61 
 
 
549 aa  56.2  0.000001  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_008527  LACR_0763  ABC-type sugar transport system, periplasmic component  26.27 
 
 
520 aa  55.8  0.000002  Lactococcus lactis subsp. cremoris SK11  Bacteria  normal  0.34388  n/a   
 
 
-
 
NC_010001  Cphy_1529  extracellular solute-binding protein  24.04 
 
 
439 aa  55.5  0.000002  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_011661  Dtur_0310  extracellular solute-binding protein family 1  22.64 
 
 
566 aa  55.8  0.000002  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_1293  ABC-type sugar transport system periplasmic component-like protein  21.01 
 
 
564 aa  55.8  0.000002  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.719816 
 
 
-
 
NC_011369  Rleg2_3622  extracellular solute-binding protein family 1  25.71 
 
 
412 aa  55.5  0.000003  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_011898  Ccel_3350  extracellular solute-binding protein family 1  26.64 
 
 
461 aa  54.7  0.000004  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_012034  Athe_2032  extracellular solute-binding protein family 1  24.52 
 
 
531 aa  54.3  0.000006  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_02830  ABC-type sugar transport system, periplasmic component  25.32 
 
 
537 aa  54.3  0.000006  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.161796  normal 
 
 
-
 
NC_013526  Tter_2504  extracellular solute-binding protein family 1  26.17 
 
 
442 aa  53.9  0.000007  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2703  extracellular solute-binding protein family 1  29.93 
 
 
450 aa  53.5  0.000009  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.0000000263225  n/a   
 
 
-
 
NC_008786  Veis_0944  extracellular solute-binding protein  30.5 
 
 
422 aa  52.4  0.00002  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.544942  normal 
 
 
-
 
NC_012669  Bcav_1454  extracellular solute-binding protein family 1  25.1 
 
 
445 aa  52.8  0.00002  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.71759  normal 
 
 
-
 
NC_013131  Caci_3808  extracellular solute-binding protein family 1  30.33 
 
 
427 aa  52.8  0.00002  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.750227 
 
 
-
 
NC_009718  Fnod_0626  extracellular solute-binding protein  30.77 
 
 
408 aa  52  0.00003  Fervidobacterium nodosum Rt17-B1  Bacteria  unclonable  0.000000000892518  n/a   
 
 
-
 
NC_011898  Ccel_0150  extracellular solute-binding protein family 1  24.56 
 
 
567 aa  52  0.00003  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_0058  extracellular solute-binding protein, family 1  28.17 
 
 
551 aa  51.6  0.00003  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.182513 
 
 
-
 
NC_007333  Tfu_1609  ABC-type sugar transport system periplasmic component  19.88 
 
 
557 aa  51.6  0.00004  Thermobifida fusca YX  Bacteria  normal  0.051709  n/a   
 
 
-
 
NC_012669  Bcav_1708  extracellular solute-binding protein family 1  22.4 
 
 
458 aa  51.6  0.00004  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.190784  normal 
 
 
-
 
NC_013530  Xcel_1188  extracellular solute-binding protein family 1  25.3 
 
 
587 aa  51.6  0.00004  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_7725  ABC-type sugar transport system periplasmic component-like protein  25.4 
 
 
420 aa  50.8  0.00006  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_0237  extracellular solute-binding protein family 1  19.86 
 
 
444 aa  50.4  0.00007  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.368483 
 
 
-
 
NC_011899  Hore_20520  extracellular solute-binding protein family 1  20.75 
 
 
417 aa  50.4  0.00007  Halothermothrix orenii H 168  Bacteria  normal  0.561553  n/a   
 
 
-
 
NC_009620  Smed_4159  extracellular solute-binding protein  26.49 
 
 
421 aa  50.4  0.00009  Sinorhizobium medicae WSM419  Bacteria  normal  0.119299  normal  0.873951 
 
 
-
 
NC_008578  Acel_2049  extracellular solute-binding protein  27.92 
 
 
435 aa  49.7  0.0001  Acidothermus cellulolyticus 11B  Bacteria  normal  normal 
 
 
-
 
NC_010816  BLD_1301  MalE-type ABC sugar transport system periplasmic component  25.49 
 
 
441 aa  49.7  0.0001  Bifidobacterium longum DJO10A  Bacteria  normal  n/a   
 
 
-
 
NC_009953  Sare_3494  extracellular solute-binding protein  31.2 
 
 
414 aa  48.9  0.0002  Salinispora arenicola CNS-205  Bacteria  normal  normal  0.0194042 
 
 
-
 
NC_011899  Hore_13140  extracellular solute-binding protein family 1  26.92 
 
 
424 aa  49.3  0.0002  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_013174  Jden_0381  extracellular solute-binding protein family 1  24.45 
 
 
445 aa  48.9  0.0002  Jonesia denitrificans DSM 20603  Bacteria  normal  0.491759  normal 
 
 
-
 
NC_008541  Arth_3146  extracellular solute-binding protein  26.79 
 
 
424 aa  48.5  0.0003  Arthrobacter sp. FB24  Bacteria  normal  0.0629231  n/a   
 
 
-
 
NC_011898  Ccel_0200  extracellular solute-binding protein family 1  25.47 
 
 
441 aa  48.5  0.0003  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_012034  Athe_0849  extracellular solute-binding protein family 1  22.42 
 
 
558 aa  48.5  0.0003  Anaerocellum thermophilum DSM 6725  Bacteria  normal  0.206456  n/a   
 
 
-
 
NC_013093  Amir_1846  extracellular solute-binding protein family 1  31.82 
 
 
425 aa  48.5  0.0003  Actinosynnema mirum DSM 43827  Bacteria  normal  0.169612  n/a   
 
 
-
 
NC_012793  GWCH70_1463  extracellular solute-binding protein family 1  26.11 
 
 
444 aa  48.1  0.0004  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_012034  Athe_0847  extracellular solute-binding protein family 1  22.32 
 
 
556 aa  47.8  0.0005  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_014151  Cfla_3054  extracellular solute-binding protein family 1  31.62 
 
 
429 aa  47.4  0.0007  Cellulomonas flavigena DSM 20109  Bacteria  normal  normal  0.0183103 
 
 
-
 
NC_011899  Hore_19900  extracellular solute-binding protein family 1  24.02 
 
 
415 aa  47.4  0.0008  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_0374  extracellular solute-binding protein family 1  22.16 
 
 
458 aa  47.4  0.0008  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.0240532 
 
 
-
 
NC_009664  Krad_0409  extracellular solute-binding protein family 1  20.57 
 
 
561 aa  46.6  0.001  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.665828  normal  0.0938708 
 
 
-
 
NC_010001  Cphy_0931  extracellular solute-binding protein  21.21 
 
 
544 aa  46.6  0.001  Clostridium phytofermentans ISDg  Bacteria  normal  0.0552135  n/a   
 
 
-
 
NC_013595  Sros_1494  ABC-type sugar transport system periplasmic component-like protein  29.71 
 
 
438 aa  46.6  0.001  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_3775  extracellular solute-binding protein family 1  26.52 
 
 
459 aa  46.6  0.001  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.137854  normal 
 
 
-
 
NC_013093  Amir_3336  extracellular solute-binding protein family 1  19.52 
 
 
537 aa  46.6  0.001  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_3366  extracellular solute-binding protein family 1  27.27 
 
 
441 aa  47  0.001  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_008527  LACR_1478  ABC-type sugar transport system, periplasmic component  27.97 
 
 
439 aa  45.8  0.002  Lactococcus lactis subsp. cremoris SK11  Bacteria  unclonable  0.000417686  n/a   
 
 
-
 
NC_012853  Rleg_5698  extracellular solute-binding protein family 1  28.89 
 
 
412 aa  46.2  0.002  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.145305  normal  0.141272 
 
 
-
 
NC_013172  Bfae_04000  ABC-type sugar transport system, periplasmic component  23.68 
 
 
445 aa  46.2  0.002  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013525  Tter_1291  extracellular solute-binding protein family 1  27.38 
 
 
470 aa  46.2  0.002  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_007494  RSP_3674  ABC sugar transporter, periplasmic binding protein  25.66 
 
 
404 aa  45.1  0.003  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_014158  Tpau_1269  extracellular solute-binding protein family 1  27.05 
 
 
412 aa  45.1  0.003  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_009050  Rsph17029_3409  extracellular solute-binding protein  25.66 
 
 
404 aa  45.1  0.003  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.280364  normal  0.614723 
 
 
-
 
NC_013595  Sros_2194  ABC-type sugar transport system periplasmic component-like protein  25.86 
 
 
443 aa  45.1  0.003  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_3587  extracellular solute-binding protein family 1  32.09 
 
 
441 aa  45.4  0.003  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.935518  normal  0.988969 
 
 
-
 
NC_013172  Bfae_12990  ABC-type sugar transport system, periplasmic component  25.73 
 
 
511 aa  45.1  0.003  Brachybacterium faecium DSM 4810  Bacteria  normal  0.232436  n/a   
 
 
-
 
NC_013526  Tter_2294  extracellular solute-binding protein family 1  30.16 
 
 
448 aa  45.4  0.003  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_1105  extracellular solute-binding protein family 1  25.56 
 
 
442 aa  44.7  0.004  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.314126  normal  0.258829 
 
 
-
 
NC_012034  Athe_2052  extracellular solute-binding protein family 1  19.72 
 
 
565 aa  44.7  0.004  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_4682  extracellular solute-binding protein family 1  25.42 
 
 
565 aa  45.1  0.004  Catenulispora acidiphila DSM 44928  Bacteria  decreased coverage  0.00316141  normal 
 
 
-
 
NC_013521  Sked_11540  ABC-type sugar transport system, periplasmic component  29.17 
 
 
428 aa  44.7  0.004  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.0159385 
 
 
-
 
NC_011369  Rleg2_1218  extracellular solute-binding protein family 1  27.46 
 
 
444 aa  44.3  0.005  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_011898  Ccel_0998  extracellular solute-binding protein family 1  41.18 
 
 
451 aa  44.3  0.005  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
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