71 homologs were found in PanDaTox collection
for query gene LACR_1435 on replicon NC_008527
Organism: Lactococcus lactis subsp. cremoris SK11



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008527  LACR_1435  ABC-type sugar transport system, periplasmic component  100 
 
 
435 aa  870    Lactococcus lactis subsp. cremoris SK11  Bacteria  normal  0.0110058  n/a   
 
 
-
 
NC_009767  Rcas_1879  extracellular solute-binding protein  25.99 
 
 
452 aa  117  6e-25  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.29051 
 
 
-
 
NC_010001  Cphy_2466  extracellular solute-binding protein  24.05 
 
 
473 aa  116  8.999999999999998e-25  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.00000586108  n/a   
 
 
-
 
NC_009523  RoseRS_2896  extracellular solute-binding protein  25.73 
 
 
452 aa  114  3e-24  Roseiflexus sp. RS-1  Bacteria  normal  0.034507  normal 
 
 
-
 
NC_013946  Mrub_0284  extracellular solute-binding protein family 1  23.12 
 
 
410 aa  92.8  1e-17  Meiothermus ruber DSM 1279  Bacteria  normal  0.0514987  normal 
 
 
-
 
NC_014165  Tbis_0842  extracellular solute-binding protein family 1  23.96 
 
 
432 aa  92.8  1e-17  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.516605 
 
 
-
 
NC_007333  Tfu_0934  putative solute binding lipoprotein  25.66 
 
 
432 aa  88.6  2e-16  Thermobifida fusca YX  Bacteria  normal  0.46058  n/a   
 
 
-
 
NC_008010  Dgeo_2859  extracellular solute-binding protein  25.19 
 
 
417 aa  83.6  0.000000000000007  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.511665  n/a   
 
 
-
 
NC_007908  Rfer_1099  extracellular solute-binding protein  24.31 
 
 
420 aa  82.4  0.00000000000001  Rhodoferax ferrireducens T118  Bacteria  unclonable  0.000000491601  n/a   
 
 
-
 
NC_013172  Bfae_19280  ABC-type sugar transport system, periplasmic component  21.88 
 
 
416 aa  80.1  0.00000000000008  Brachybacterium faecium DSM 4810  Bacteria  normal  0.147667  n/a   
 
 
-
 
NC_013721  HMPREF0424_1316  extracellular solute-binding protein  32.02 
 
 
423 aa  78.2  0.0000000000003  Gardnerella vaginalis 409-05  Bacteria  n/a    normal 
 
 
-
 
NC_012669  Bcav_1454  extracellular solute-binding protein family 1  22.45 
 
 
445 aa  75.5  0.000000000002  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.71759  normal 
 
 
-
 
NC_011899  Hore_04270  extracellular solute-binding protein family 1  22.78 
 
 
418 aa  73.2  0.000000000009  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2644  extracellular solute-binding protein family 1  21.22 
 
 
431 aa  73.2  0.000000000009  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_011898  Ccel_2112  extracellular solute-binding protein family 1  22.99 
 
 
449 aa  70.9  0.00000000004  Clostridium cellulolyticum H10  Bacteria  normal  0.0884714  n/a   
 
 
-
 
NC_013510  Tcur_1736  extracellular solute-binding protein family 1  25.82 
 
 
435 aa  70.1  0.00000000007  Thermomonospora curvata DSM 43183  Bacteria  normal  0.395658  n/a   
 
 
-
 
NC_008578  Acel_0130  extracellular solute-binding protein  25.44 
 
 
462 aa  69.7  0.00000000009  Acidothermus cellulolyticus 11B  Bacteria  normal  normal 
 
 
-
 
NC_009784  VIBHAR_06941  ABC-type sugar transport system periplasmic protein  27.23 
 
 
229 aa  66.6  0.0000000007  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_013595  Sros_7173  sugar transport system (sugar-binding protein)  24.48 
 
 
433 aa  65.5  0.000000002  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.119283 
 
 
-
 
NC_010816  BLD_0923  MalE-type ABC sugar transport system periplasmic component  23.19 
 
 
450 aa  63.5  0.000000006  Bifidobacterium longum DJO10A  Bacteria  normal  0.293658  n/a   
 
 
-
 
NC_009939  Dgeo_2919  ABC-type sugar transport system, periplasmic component  30.46 
 
 
407 aa  63.5  0.000000007  Deinococcus geothermalis DSM 11300  Bacteria  n/a    n/a   
 
 
-
 
NC_010816  BLD_1008  MalE-type ABC sugar transport system periplasmic component  25.23 
 
 
449 aa  62.8  0.00000001  Bifidobacterium longum DJO10A  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_3566  extracellular solute-binding protein family 1  23.08 
 
 
434 aa  62  0.00000002  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.0143758 
 
 
-
 
NC_010816  BLD_0922  MalE-type ABC sugar transport system periplasmic component  25.74 
 
 
447 aa  62.4  0.00000002  Bifidobacterium longum DJO10A  Bacteria  normal  0.755265  n/a   
 
 
-
 
NC_013093  Amir_1785  extracellular solute-binding protein family 1  22.44 
 
 
424 aa  60.8  0.00000005  Actinosynnema mirum DSM 43827  Bacteria  normal  0.155279  n/a   
 
 
-
 
NC_013595  Sros_3308  ABC-type sugar transport system periplasmic component-like protein  25.48 
 
 
450 aa  60.5  0.00000006  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.190223 
 
 
-
 
NC_012669  Bcav_0556  extracellular solute-binding protein family 1  21.62 
 
 
430 aa  60.1  0.00000008  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.71623 
 
 
-
 
NC_009380  Strop_1557  extracellular solute-binding protein  23.3 
 
 
428 aa  59.7  0.0000001  Salinispora tropica CNB-440  Bacteria  normal  normal  0.920193 
 
 
-
 
NC_013131  Caci_5330  extracellular solute-binding protein family 1  22.99 
 
 
438 aa  58.2  0.0000003  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.489769  normal  0.341368 
 
 
-
 
NC_013525  Tter_0183  extracellular solute-binding protein family 1  31.98 
 
 
429 aa  56.6  0.0000008  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_013595  Sros_3538  Maltose-binding periplasmic protein/domains- like protein  29.11 
 
 
406 aa  55.1  0.000002  Streptosporangium roseum DSM 43021  Bacteria  normal  0.385239  normal 
 
 
-
 
NC_013595  Sros_3842  extracellular solute-binding protein family 1  21.93 
 
 
429 aa  53.1  0.00001  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0316121  normal  0.0422385 
 
 
-
 
NC_013526  Tter_2504  extracellular solute-binding protein family 1  24.49 
 
 
442 aa  52  0.00002  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_3808  extracellular solute-binding protein family 1  23.69 
 
 
427 aa  52  0.00002  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.750227 
 
 
-
 
NC_011830  Dhaf_2627  extracellular solute-binding protein family 1  23.71 
 
 
434 aa  51.2  0.00003  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.00662506  n/a   
 
 
-
 
NC_010001  Cphy_0592  extracellular solute-binding protein  25.63 
 
 
456 aa  51.6  0.00003  Clostridium phytofermentans ISDg  Bacteria  decreased coverage  0.000165278  n/a   
 
 
-
 
NC_009921  Franean1_5459  extracellular solute-binding protein  23.08 
 
 
422 aa  51.6  0.00003  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_008312  Tery_1604  extracellular solute-binding protein  20.47 
 
 
425 aa  51.2  0.00004  Trichodesmium erythraeum IMS101  Bacteria  normal  normal 
 
 
-
 
NC_007604  Synpcc7942_2417  transcriptional regulator, ABC transporter  21.51 
 
 
421 aa  50.4  0.00005  Synechococcus elongatus PCC 7942  Bacteria  normal  normal  0.0335393 
 
 
-
 
NC_014165  Tbis_1891  extracellular solute-binding protein family 1  25.33 
 
 
447 aa  50.1  0.00009  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.276259 
 
 
-
 
NC_010320  Teth514_1099  extracellular solute-binding protein  24.51 
 
 
457 aa  49.3  0.0001  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_2731  extracellular solute-binding protein family 1  21.41 
 
 
454 aa  49.3  0.0001  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013174  Jden_0381  extracellular solute-binding protein family 1  21.72 
 
 
445 aa  49.3  0.0001  Jonesia denitrificans DSM 20603  Bacteria  normal  0.491759  normal 
 
 
-
 
NC_009012  Cthe_1957  extracellular solute-binding protein  20.36 
 
 
446 aa  49.7  0.0001  Clostridium thermocellum ATCC 27405  Bacteria  decreased coverage  0.0000130159  n/a   
 
 
-
 
NC_013131  Caci_2031  extracellular solute-binding protein family 1  21.38 
 
 
442 aa  49.7  0.0001  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.298737 
 
 
-
 
NC_009953  Sare_0393  extracellular solute-binding protein  20.45 
 
 
434 aa  48.9  0.0002  Salinispora arenicola CNS-205  Bacteria  normal  normal  0.0128577 
 
 
-
 
NC_008530  LGAS_1846  ABC-type sugar transport system, periplasmic component  26.49 
 
 
442 aa  48.9  0.0002  Lactobacillus gasseri ATCC 33323  Bacteria  hitchhiker  0.00000328949  hitchhiker  0.000299807 
 
 
-
 
NC_011899  Hore_20630  extracellular solute-binding protein family 1  24.2 
 
 
414 aa  48.9  0.0002  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_3964  extracellular solute-binding protein family 1  23.32 
 
 
435 aa  48.1  0.0003  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.340566  normal  0.592754 
 
 
-
 
NC_007802  Jann_2588  extracellular solute-binding protein  22.05 
 
 
419 aa  48.1  0.0003  Jannaschia sp. CCS1  Bacteria  hitchhiker  0.000485668  normal 
 
 
-
 
NC_010003  Pmob_0523  extracellular solute-binding protein  23.67 
 
 
416 aa  47.8  0.0004  Petrotoga mobilis SJ95  Bacteria  normal  n/a   
 
 
-
 
NC_009953  Sare_1506  extracellular solute-binding protein  23.81 
 
 
428 aa  47.4  0.0005  Salinispora arenicola CNS-205  Bacteria  normal  0.629333  decreased coverage  0.000020483 
 
 
-
 
NC_011884  Cyan7425_2553  extracellular solute-binding protein family 1  21.43 
 
 
432 aa  47.4  0.0005  Cyanothece sp. PCC 7425  Bacteria  normal  0.964139  normal 
 
 
-
 
NC_013525  Tter_0829  extracellular solute-binding protein family 1  26.59 
 
 
504 aa  47.4  0.0005  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_013721  HMPREF0424_1064  extracellular solute-binding protein  20.58 
 
 
480 aa  47  0.0006  Gardnerella vaginalis 409-05  Bacteria  n/a    normal  0.075314 
 
 
-
 
NC_008025  Dgeo_0687  extracellular solute-binding protein  23.12 
 
 
407 aa  47  0.0006  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.376534  normal  0.15795 
 
 
-
 
NC_013947  Snas_0048  extracellular solute-binding protein family 1  21.96 
 
 
434 aa  47  0.0007  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013174  Jden_0310  extracellular solute-binding protein family 1  22.44 
 
 
440 aa  47  0.0007  Jonesia denitrificans DSM 20603  Bacteria  normal  0.0877495  normal  0.113221 
 
 
-
 
NC_009667  Oant_2485  extracellular solute-binding protein  35.59 
 
 
415 aa  45.4  0.002  Ochrobactrum anthropi ATCC 49188  Bacteria  decreased coverage  0.00421769  n/a   
 
 
-
 
NC_009784  VIBHAR_06942  hypothetical protein  28.81 
 
 
157 aa  45.4  0.002  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_011886  Achl_0399  extracellular solute-binding protein family 1  24.08 
 
 
430 aa  44.7  0.003  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_012669  Bcav_1698  extracellular solute-binding protein family 1  21.17 
 
 
447 aa  44.7  0.003  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_1494  ABC-type sugar transport system periplasmic component-like protein  23.93 
 
 
438 aa  44.7  0.004  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_014213  Mesil_3226  Transcriptional regulator  23.98 
 
 
410 aa  43.9  0.006  Meiothermus silvanus DSM 9946  Bacteria  normal  0.101031  normal 
 
 
-
 
NC_014213  Mesil_3422  ABC-type sugar transport systems permease component  23.98 
 
 
410 aa  43.9  0.006  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_012034  Athe_0614  extracellular solute-binding protein family 1  25.86 
 
 
435 aa  43.5  0.007  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_013525  Tter_0126  extracellular solute-binding protein family 1  27.85 
 
 
477 aa  43.1  0.009  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_012850  Rleg_4344  extracellular solute-binding protein family 1  21.11 
 
 
428 aa  43.1  0.009  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.0302279  hitchhiker  0.00000351134 
 
 
-
 
NC_010816  BLD_1874  MalE-type ABC sugar transport system periplasmic component  25.53 
 
 
427 aa  43.1  0.009  Bifidobacterium longum DJO10A  Bacteria  normal  0.0756635  n/a   
 
 
-
 
NC_010816  BLD_1492  MalE-type ABC sugar transport system periplasmic component  25.35 
 
 
441 aa  43.1  0.01  Bifidobacterium longum DJO10A  Bacteria  normal  n/a   
 
 
-
 
NC_008527  LACR_1478  ABC-type sugar transport system, periplasmic component  27.22 
 
 
439 aa  43.1  0.01  Lactococcus lactis subsp. cremoris SK11  Bacteria  unclonable  0.000417686  n/a   
 
 
-
 
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