More than 300 homologs were found in PanDaTox collection
for query gene Ksed_23660 on replicon NC_013169
Organism: Kytococcus sedentarius DSM 20547



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013169  Ksed_23660  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  100 
 
 
222 aa  442  1e-123  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_4009  two component transcriptional regulator, LuxR family  52.49 
 
 
231 aa  235  3e-61  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.0669057  normal  0.324745 
 
 
-
 
NC_013093  Amir_7009  two component transcriptional regulator, LuxR family  46.33 
 
 
218 aa  201  9e-51  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0896567  n/a   
 
 
-
 
NC_012669  Bcav_2822  two component transcriptional regulator, LuxR family  49.11 
 
 
231 aa  198  3.9999999999999996e-50  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.311075  normal 
 
 
-
 
NC_013172  Bfae_20460  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  46.82 
 
 
229 aa  192  4e-48  Brachybacterium faecium DSM 4810  Bacteria  normal  0.0212792  n/a   
 
 
-
 
NC_014151  Cfla_2391  two component transcriptional regulator, LuxR family  45.18 
 
 
239 aa  190  2e-47  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0696687  hitchhiker  0.00128542 
 
 
-
 
NC_008699  Noca_3643  two component LuxR family transcriptional regulator  44.59 
 
 
215 aa  186  3e-46  Nocardioides sp. JS614  Bacteria  normal  0.516516  n/a   
 
 
-
 
NC_010816  BLD_0671  putative response regulator  42.68 
 
 
248 aa  184  9e-46  Bifidobacterium longum DJO10A  Bacteria  normal  0.248332  n/a   
 
 
-
 
NC_013510  Tcur_2302  two component transcriptional regulator, LuxR family  43.44 
 
 
226 aa  183  2.0000000000000003e-45  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0191252  n/a   
 
 
-
 
NC_012803  Mlut_21900  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  43.24 
 
 
230 aa  182  2.0000000000000003e-45  Micrococcus luteus NCTC 2665  Bacteria  hitchhiker  0.00486265  n/a   
 
 
-
 
NC_013521  Sked_08490  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  45.58 
 
 
236 aa  182  2.0000000000000003e-45  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.199706  normal  0.526513 
 
 
-
 
NC_013530  Xcel_2601  two component transcriptional regulator, LuxR family  44.55 
 
 
234 aa  182  4.0000000000000006e-45  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.1212  n/a   
 
 
-
 
NC_013721  HMPREF0424_0644  response regulator receiver domain protein  36.9 
 
 
261 aa  182  5.0000000000000004e-45  Gardnerella vaginalis 409-05  Bacteria  n/a    normal  0.520039 
 
 
-
 
NC_013739  Cwoe_3768  two component transcriptional regulator, LuxR family  44.75 
 
 
223 aa  181  5.0000000000000004e-45  Conexibacter woesei DSM 14684  Bacteria  normal  0.28303  normal  0.763501 
 
 
-
 
NC_013739  Cwoe_0549  two component transcriptional regulator, LuxR family  47.47 
 
 
220 aa  181  8.000000000000001e-45  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_008541  Arth_4134  two component LuxR family transcriptional regulator  40.25 
 
 
250 aa  181  8.000000000000001e-45  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_7301  response regulator receiver protein  45.54 
 
 
220 aa  181  8.000000000000001e-45  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_1049  two component transcriptional regulator, LuxR family  44.29 
 
 
222 aa  181  8.000000000000001e-45  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.661499  normal  0.245945 
 
 
-
 
NC_013739  Cwoe_4937  two component transcriptional regulator, LuxR family  46.15 
 
 
224 aa  180  1e-44  Conexibacter woesei DSM 14684  Bacteria  normal  0.570807  normal  0.210467 
 
 
-
 
NC_014165  Tbis_0951  LuxR family two component transcriptional regulator  43.84 
 
 
221 aa  179  4e-44  Thermobispora bispora DSM 43833  Bacteria  normal  0.392411  normal  0.343359 
 
 
-
 
NC_013521  Sked_03540  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  42.08 
 
 
226 aa  178  4.999999999999999e-44  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_1846  LuxR family two component transcriptional regulator  43.18 
 
 
226 aa  178  5.999999999999999e-44  Thermobispora bispora DSM 43833  Bacteria  normal  0.699471  normal 
 
 
-
 
NC_009664  Krad_1350  two component transcriptional regulator, LuxR family  43.17 
 
 
249 aa  177  8e-44  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.691965  normal 
 
 
-
 
NC_009921  Franean1_3185  two component LuxR family transcriptional regulator  42.27 
 
 
223 aa  177  1e-43  Frankia sp. EAN1pec  Bacteria  normal  0.704721  normal 
 
 
-
 
NC_013595  Sros_5905  response regulator receiver protein  43.44 
 
 
227 aa  177  1e-43  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0252894  normal  0.145246 
 
 
-
 
NC_013947  Snas_4946  two component transcriptional regulator, LuxR family  44.55 
 
 
224 aa  176  4e-43  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.13115  normal 
 
 
-
 
NC_013131  Caci_6529  two component transcriptional regulator, LuxR family  43.95 
 
 
224 aa  175  4e-43  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.270807  normal  0.114568 
 
 
-
 
NC_013169  Ksed_04500  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  45.87 
 
 
244 aa  175  5e-43  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_0404  two component transcriptional regulator, LuxR family  45.58 
 
 
218 aa  175  6e-43  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0987348  normal 
 
 
-
 
NC_013093  Amir_4051  two component transcriptional regulator, LuxR family  44.24 
 
 
225 aa  174  7e-43  Actinosynnema mirum DSM 43827  Bacteria  decreased coverage  0.00308286  n/a   
 
 
-
 
NC_013739  Cwoe_0676  two component transcriptional regulator, LuxR family  45.58 
 
 
215 aa  174  9e-43  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_0236  two component transcriptional regulator, LuxR family  45.45 
 
 
224 aa  174  9.999999999999999e-43  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_8412  two component transcriptional regulator, LuxR family  42.27 
 
 
239 aa  173  1.9999999999999998e-42  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_1981  two component transcriptional regulator, LuxR family  41.82 
 
 
230 aa  173  1.9999999999999998e-42  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_4577  response regulator receiver protein  43.89 
 
 
223 aa  173  1.9999999999999998e-42  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.172592 
 
 
-
 
NC_013131  Caci_0956  two component transcriptional regulator, LuxR family  45.07 
 
 
221 aa  173  1.9999999999999998e-42  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_4575  two component transcriptional regulator, LuxR family  43.38 
 
 
224 aa  173  1.9999999999999998e-42  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.703378  normal  0.112036 
 
 
-
 
NC_011886  Achl_3912  two component transcriptional regulator, LuxR family  40.55 
 
 
230 aa  173  1.9999999999999998e-42  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_014210  Ndas_3601  two component transcriptional regulator, LuxR family  46.05 
 
 
222 aa  172  2.9999999999999996e-42  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.324048  normal 
 
 
-
 
NC_009664  Krad_1998  two component transcriptional regulator, LuxR family  41.63 
 
 
225 aa  172  2.9999999999999996e-42  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.12496  normal 
 
 
-
 
NC_013159  Svir_39200  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  43.69 
 
 
218 aa  172  2.9999999999999996e-42  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.254077 
 
 
-
 
NC_009380  Strop_1796  response regulator receiver  44.55 
 
 
230 aa  172  3.9999999999999995e-42  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_014151  Cfla_2842  two component transcriptional regulator, LuxR family  40.81 
 
 
226 aa  172  3.9999999999999995e-42  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.622781  decreased coverage  0.00305681 
 
 
-
 
NC_011886  Achl_2270  two component transcriptional regulator, LuxR family  39.32 
 
 
242 aa  172  3.9999999999999995e-42  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.000000000113212 
 
 
-
 
NC_013595  Sros_1523  response regulator receiver protein  44.55 
 
 
215 aa  172  5e-42  Streptosporangium roseum DSM 43021  Bacteria  normal  0.894169  normal  0.0152488 
 
 
-
 
NC_009921  Franean1_4684  two component LuxR family transcriptional regulator  43.24 
 
 
223 aa  171  5.999999999999999e-42  Frankia sp. EAN1pec  Bacteria  normal  0.51425  normal 
 
 
-
 
NC_013947  Snas_4479  two component transcriptional regulator, LuxR family  40.99 
 
 
224 aa  171  5.999999999999999e-42  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.518456  normal  0.598935 
 
 
-
 
NC_013510  Tcur_1300  two component transcriptional regulator, LuxR family  43.64 
 
 
215 aa  171  6.999999999999999e-42  Thermomonospora curvata DSM 43183  Bacteria  normal  0.145336  n/a   
 
 
-
 
NC_013131  Caci_7105  two component transcriptional regulator, LuxR family  41.47 
 
 
241 aa  171  7.999999999999999e-42  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.106023  normal  0.469545 
 
 
-
 
NC_013174  Jden_1873  two component transcriptional regulator, LuxR family  42.6 
 
 
233 aa  171  1e-41  Jonesia denitrificans DSM 20603  Bacteria  normal  0.145213  normal  0.385799 
 
 
-
 
NC_013595  Sros_3244  response regulator receiver protein  40.37 
 
 
218 aa  170  1e-41  Streptosporangium roseum DSM 43021  Bacteria  hitchhiker  0.000568428  normal  0.332742 
 
 
-
 
NC_013172  Bfae_25060  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  42.08 
 
 
222 aa  171  1e-41  Brachybacterium faecium DSM 4810  Bacteria  normal  0.444591  n/a   
 
 
-
 
NC_013170  Ccur_01320  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  42.2 
 
 
261 aa  170  2e-41  Cryptobacterium curtum DSM 15641  Bacteria  normal  normal 
 
 
-
 
NC_007333  Tfu_1845  LuxR response regulator receiver  40.83 
 
 
215 aa  169  2e-41  Thermobifida fusca YX  Bacteria  hitchhiker  0.00433344  n/a   
 
 
-
 
NC_013757  Gobs_2015  two component transcriptional regulator, LuxR family  42.34 
 
 
232 aa  170  2e-41  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.706703  n/a   
 
 
-
 
NC_013739  Cwoe_1616  two component transcriptional regulator, LuxR family  42.34 
 
 
229 aa  169  2e-41  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_2557  two component transcriptional regulator, LuxR family  41.63 
 
 
224 aa  169  4e-41  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.231398  normal  0.0978001 
 
 
-
 
NC_013947  Snas_5644  two component transcriptional regulator, LuxR family  44.13 
 
 
225 aa  169  4e-41  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.114252 
 
 
-
 
NC_009664  Krad_1198  two component transcriptional regulator, LuxR family  42.2 
 
 
225 aa  169  4e-41  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.109916  normal  0.0247339 
 
 
-
 
NC_013595  Sros_4115  response regulator receiver protein  44.09 
 
 
216 aa  168  7e-41  Streptosporangium roseum DSM 43021  Bacteria  normal  0.071707  normal  0.0608108 
 
 
-
 
NC_013595  Sros_1746  response regulator receiver protein  43.26 
 
 
217 aa  168  8e-41  Streptosporangium roseum DSM 43021  Bacteria  normal  0.59096  normal  0.157721 
 
 
-
 
NC_013131  Caci_7843  two component transcriptional regulator, LuxR family  41.67 
 
 
231 aa  167  9e-41  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.176081 
 
 
-
 
NC_013947  Snas_2469  two component transcriptional regulator, LuxR family  43.78 
 
 
214 aa  166  2e-40  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.126163  normal 
 
 
-
 
NC_013441  Gbro_4119  response regulator receiver  42.61 
 
 
230 aa  166  2.9999999999999998e-40  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_2780  two component transcriptional regulator, LuxR family  41.1 
 
 
219 aa  165  4e-40  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.855193  normal  0.402473 
 
 
-
 
NC_013739  Cwoe_3988  two component transcriptional regulator, LuxR family  41.01 
 
 
228 aa  165  4e-40  Conexibacter woesei DSM 14684  Bacteria  normal  0.0354189  normal  0.736565 
 
 
-
 
NC_013947  Snas_2037  two component transcriptional regulator, LuxR family  43.44 
 
 
225 aa  165  5.9999999999999996e-40  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.137578 
 
 
-
 
NC_013595  Sros_3251  response regulator receiver protein  42.47 
 
 
221 aa  165  5.9999999999999996e-40  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0793449  normal 
 
 
-
 
NC_012669  Bcav_0102  two component transcriptional regulator, LuxR family  43.18 
 
 
221 aa  165  5.9999999999999996e-40  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0637251  normal 
 
 
-
 
NC_013131  Caci_7812  two component transcriptional regulator, LuxR family  42.79 
 
 
227 aa  164  1.0000000000000001e-39  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_1020  response regulator receiver  39.55 
 
 
218 aa  164  1.0000000000000001e-39  Nocardioides sp. JS614  Bacteria  normal  0.648692  n/a   
 
 
-
 
NC_013947  Snas_4662  two component transcriptional regulator, LuxR family  40.54 
 
 
221 aa  163  2.0000000000000002e-39  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.142047  hitchhiker  0.00679998 
 
 
-
 
NC_013739  Cwoe_0356  two component transcriptional regulator, LuxR family  42.59 
 
 
220 aa  163  2.0000000000000002e-39  Conexibacter woesei DSM 14684  Bacteria  normal  0.165726  normal  0.0985551 
 
 
-
 
NC_009953  Sare_1782  two component LuxR family transcriptional regulator  42.99 
 
 
230 aa  163  2.0000000000000002e-39  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.0025253 
 
 
-
 
NC_013595  Sros_5304  response regulator receiver protein  39.55 
 
 
220 aa  163  2.0000000000000002e-39  Streptosporangium roseum DSM 43021  Bacteria  normal  0.128918  normal 
 
 
-
 
NC_013595  Sros_5619  response regulator receiver protein  41.26 
 
 
226 aa  162  3e-39  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0556461  normal  0.802866 
 
 
-
 
NC_013093  Amir_2232  two component transcriptional regulator, LuxR family  42.4 
 
 
302 aa  162  3e-39  Actinosynnema mirum DSM 43827  Bacteria  normal  0.501029  n/a   
 
 
-
 
NC_013595  Sros_7377  response regulator receiver protein  45 
 
 
216 aa  162  3e-39  Streptosporangium roseum DSM 43021  Bacteria  normal  0.92051  normal 
 
 
-
 
NC_014211  Ndas_4872  two component transcriptional regulator, LuxR family  41.63 
 
 
232 aa  162  4.0000000000000004e-39  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.247388  normal 
 
 
-
 
NC_007333  Tfu_0767  LuxR response regulator receiver  43.18 
 
 
221 aa  162  4.0000000000000004e-39  Thermobifida fusca YX  Bacteria  normal  0.88397  n/a   
 
 
-
 
NC_013093  Amir_3219  two component transcriptional regulator, LuxR family  43.18 
 
 
208 aa  162  4.0000000000000004e-39  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_4263  two component transcriptional regulator, LuxR family  42.4 
 
 
230 aa  162  4.0000000000000004e-39  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.455968 
 
 
-
 
NC_013131  Caci_6963  two component transcriptional regulator, LuxR family  40.37 
 
 
225 aa  162  5.0000000000000005e-39  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.029709  normal 
 
 
-
 
NC_012803  Mlut_21850  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  38.18 
 
 
222 aa  161  6e-39  Micrococcus luteus NCTC 2665  Bacteria  normal  0.118113  n/a   
 
 
-
 
NC_014210  Ndas_2087  two component transcriptional regulator, LuxR family  41.01 
 
 
247 aa  161  6e-39  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.73112  normal 
 
 
-
 
NC_013947  Snas_3287  two component transcriptional regulator, LuxR family  44.2 
 
 
233 aa  161  7e-39  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0842926  normal  0.330639 
 
 
-
 
NC_013595  Sros_0609  response regulator receiver protein  42.06 
 
 
218 aa  161  8.000000000000001e-39  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_4491  two component transcriptional regulator, LuxR family  42.92 
 
 
225 aa  161  8.000000000000001e-39  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_7160  two component transcriptional regulator, LuxR family  42.11 
 
 
224 aa  161  9e-39  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_7658  two component transcriptional regulator, LuxR family  41.63 
 
 
219 aa  160  1e-38  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_5719  two component transcriptional regulator, LuxR family  43.44 
 
 
232 aa  160  2e-38  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_2656  two component transcriptional regulator, LuxR family  39.91 
 
 
226 aa  160  2e-38  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.161573  normal 
 
 
-
 
NC_008697  Noca_4902  response regulator receiver  39.55 
 
 
216 aa  160  2e-38  Nocardioides sp. JS614  Bacteria  normal  0.443208  normal  0.676579 
 
 
-
 
NC_013595  Sros_7211  response regulator receiver protein  44.34 
 
 
215 aa  160  2e-38  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.0769384 
 
 
-
 
NC_013595  Sros_8793  response regulator receiver protein  41.7 
 
 
221 aa  159  2e-38  Streptosporangium roseum DSM 43021  Bacteria  normal  0.321987  normal 
 
 
-
 
NC_009664  Krad_4217  two component transcriptional regulator, LuxR family  40 
 
 
225 aa  159  2e-38  Kineococcus radiotolerans SRS30216  Bacteria  decreased coverage  0.000816589  normal  0.757819 
 
 
-
 
NC_009921  Franean1_7117  two component LuxR family transcriptional regulator  41.82 
 
 
214 aa  159  2e-38  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_7161  two component LuxR family transcriptional regulator  40.45 
 
 
225 aa  160  2e-38  Frankia sp. EAN1pec  Bacteria  normal  0.0588186  normal  0.118819 
 
 
-
 
NC_013947  Snas_1740  two component transcriptional regulator, LuxR family  38.36 
 
 
228 aa  160  2e-38  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_3846  two component LuxR family transcriptional regulator  41.28 
 
 
249 aa  159  3e-38  Frankia sp. EAN1pec  Bacteria  normal  0.525033  normal  0.770826 
 
 
-
 
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