286 homologs were found in PanDaTox collection
for query gene Ksed_22180 on replicon NC_013169
Organism: Kytococcus sedentarius DSM 20547



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013169  Ksed_22180  methylmalonyl-CoA mutase, N-terminal domain/subunit  100 
 
 		 710 aa  1387    Kytococcus sedentarius DSM 20547  Bacteria  normal  0.0921601  normal  0.211635 
 
 
-
 
NC_013510  Tcur_2506  Methylmalonyl-CoA mutase  35.71 
 
 		 614 aa  311  2.9999999999999997e-83  Thermomonospora curvata DSM 43183  Bacteria  decreased coverage  0.0000082079  n/a   
 
 
-
 
NC_013757  Gobs_4374  Methylmalonyl-CoA mutase  38.51 
 
 		 640 aa  311  2.9999999999999997e-83  Geodermatophilus obscurus DSM 43160  Bacteria  normal  1  n/a   
 
 
-
 
NC_007777  Francci3_3006  methylmalonyl-CoA mutase  37.54 
 
 		 660 aa  305  2.0000000000000002e-81  Frankia sp. CcI3  Bacteria  normal  0.84067  normal  0.316965 
 
 
-
 
NC_007333  Tfu_2761  methylmalonyl-CoA mutase  36.55 
 
 		 630 aa  304  4.0000000000000003e-81  Thermobifida fusca YX  Bacteria  normal  0.257221  n/a   
 
 
-
 
NC_013093  Amir_6419  Methylmalonyl-CoA mutase  37.8 
 
 		 593 aa  280  4e-74  Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
-
 
NC_013595  Sros_3187  Methylmalonyl-CoA mutase  35.76 
 
 		 633 aa  277  6e-73  Streptosporangium roseum DSM 43021  Bacteria  normal  0.800977  normal  0.217414 
 
 
-
 
NC_014211  Ndas_5544  Methylmalonyl-CoA mutase  39.32 
 
 		 644 aa  274  5.000000000000001e-72  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.11647  normal  1 
 
 
-
 
NC_013159  Svir_05670  methylmalonyl-CoA mutase, N-terminal domain/subunit  36.55 
 
 		 622 aa  272  2e-71  Saccharomonospora viridis DSM 43017  Bacteria  normal  1  normal  1 
 
 
-
 
NC_014165  Tbis_1921  methylmalonyl-CoA mutase  35.29 
 
 		 601 aa  264  4e-69  Thermobispora bispora DSM 43833  Bacteria  decreased coverage  0.00796016  normal  0.671948 
 
 
-
 
NC_009921  Franean1_1943  methylmalonyl-CoA mutase  34.19 
 
 		 653 aa  251  4e-65  Frankia sp. EAN1pec  Bacteria  normal  1  normal  0.133903 
 
 
-
 
NC_009077  Mjls_3134  methylmalonyl-CoA mutase, beta subunit  33.62 
 
 		 615 aa  248  2e-64  Mycobacterium sp. JLS  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007643  Rru_A2480  methylmalonyl-CoA mutase  33.24 
 
 		 698 aa  245  1.9999999999999999e-63  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  1  n/a   
 
 
-
 
NC_008146  Mmcs_3123  methylmalonyl-CoA mutase, small subunit  33.33 
 
 		 615 aa  244  5e-63  Mycobacterium sp. MCS  Bacteria  normal  0.987709  n/a   
 
 
-
 
NC_008705  Mkms_3184  methylmalonyl-CoA mutase, beta subunit  33.33 
 
 		 615 aa  244  5e-63  Mycobacterium sp. KMS  Bacteria  normal  1  normal  0.170851 
 
 
-
 
NC_009565  TBFG_11522  methylmalonyl-CoA mutase small subunit mutA  35.04 
 
 		 623 aa  226  1e-57  Mycobacterium tuberculosis F11  Bacteria  normal  1  normal  0.384078 
 
 
-
 
NC_007964  Nham_2636  methylmalonyl-CoA mutase  35.39 
 
 		 629 aa  224  4e-57  Nitrobacter hamburgensis X14  Bacteria  normal  0.668897  n/a   
 
 
-
 
NC_009338  Mflv_3650  methylmalonyl-CoA mutase, beta subunit  33.73 
 
 		 620 aa  216  9.999999999999999e-55  Mycobacterium gilvum PYR-GCK  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008726  Mvan_2762  methylmalonyl-CoA mutase, beta subunit  33.58 
 
 		 626 aa  215  2.9999999999999995e-54  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.0864334  normal  1 
 
 
-
 
NC_007958  RPD_1929  methylmalonyl-CoA mutase  31.88 
 
 		 623 aa  214  3.9999999999999995e-54  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.102484  normal  1 
 
 
-
 
NC_013441  Gbro_2419  Methylmalonyl-CoA mutase  33.76 
 
 		 652 aa  210  9e-53  Gordonia bronchialis DSM 43247  Bacteria  normal  0.751014  n/a   
 
 
-
 
NC_007778  RPB_3536  methylmalonyl-CoA mutase  33.51 
 
 		 623 aa  208  3e-52  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.0287465  normal  0.381464 
 
 
-
 
NC_009485  BBta_3023  methylmalonyl-CoA mutase small subunit (MCM-beta)  33.28 
 
 		 621 aa  208  3e-52  Bradyrhizobium sp. BTAi1  Bacteria  normal  1  normal  0.577425 
 
 
-
 
NC_007925  RPC_1762  methylmalonyl-CoA mutase  32.33 
 
 		 621 aa  204  6e-51  Rhodopseudomonas palustris BisB18  Bacteria  normal  1  normal  0.223035 
 
 
-
 
NC_011894  Mnod_5425  methylmalonyl-CoA mutase  34.15 
 
 		 612 aa  199  1.0000000000000001e-49  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.559772  n/a   
 
 
-
 
NC_011004  Rpal_2041  Methylmalonyl-CoA mutase  34.49 
 
 		 623 aa  197  7e-49  Rhodopseudomonas palustris TIE-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_014158  Tpau_2104  Methylmalonyl-CoA mutase  33.14 
 
 		 597 aa  196  2e-48  Tsukamurella paurometabola DSM 20162  Bacteria  normal  1  n/a   
 
 
-
 
NC_007406  Nwi_2236  methylmalonyl-CoA mutase  30.82 
 
 		 639 aa  187  7e-46  Nitrobacter winogradskyi Nb-255  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012793  GWCH70_2295  methylmalonyl-CoA mutase, large subunit  25.8 
 
 		 681 aa  186  1.0000000000000001e-45  Geobacillus sp. WCH70  Bacteria  normal  1  n/a   
 
 
-
 
NC_013411  GYMC61_0278  methylmalonyl-CoA mutase, large subunit  32.93 
 
 		 682 aa  186  2.0000000000000003e-45  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_011666  Msil_3785  Methylmalonyl-CoA mutase  32.45 
 
 		 621 aa  186  2.0000000000000003e-45  Methylocella silvestris BL2  Bacteria  n/a    normal  0.546238 
 
 
-
 
NC_010511  M446_0217  methylmalonyl-CoA mutase  33.57 
 
 		 611 aa  179  2e-43  Methylobacterium sp. 4-46  Bacteria  normal  1  normal  0.0670454 
 
 
-
 
NC_010505  Mrad2831_3135  methylmalonyl-CoA mutase  31.49 
 
 		 629 aa  176  9e-43  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.227192  normal  1 
 
 
-
 
NC_011831  Cagg_1348  methylmalonyl-CoA mutase, large subunit  31.25 
 
 		 713 aa  176  9.999999999999999e-43  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.000457861  unclonable  0.00000004793 
 
 
-
 
NC_011757  Mchl_2665  Methylmalonyl-CoA mutase  32.47 
 
 		 605 aa  176  1.9999999999999998e-42  Methylobacterium chloromethanicum CM4  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010655  Amuc_1984  Methylmalonyl-CoA mutase  26.88 
 
 		 684 aa  174  3.9999999999999995e-42  Akkermansia muciniphila ATCC BAA-835  Bacteria  normal  0.611894  normal  0.0597183 
 
 
-
 
NC_009523  RoseRS_0544  methylmalonyl-CoA mutase, large subunit  31.12 
 
 		 723 aa  174  5e-42  Roseiflexus sp. RS-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010725  Mpop_2345  Methylmalonyl-CoA mutase  32.01 
 
 		 605 aa  174  5.999999999999999e-42  Methylobacterium populi BJ001  Bacteria  normal  0.418628  normal  1 
 
 
-
 
NC_010172  Mext_2388  methylmalonyl-CoA mutase  32.21 
 
 		 605 aa  174  6.999999999999999e-42  Methylobacterium extorquens PA1  Bacteria  normal  0.55342  normal  1 
 
 
-
 
NC_009767  Rcas_3871  methylmalonyl-CoA mutase, large subunit  31.88 
 
 		 720 aa  172  1e-41  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.949138  normal  0.194963 
 
 
-
 
NC_002950  PG1656  methylmalonyl-CoA mutase, small subunit  27.96 
 
 		 618 aa  171  3e-41  Porphyromonas gingivalis W83  Bacteria  n/a    normal  0.50388 
 
 
-
 
NC_010338  Caul_3629  methylmalonyl-CoA mutase  33.47 
 
 		 489 aa  167  6.9999999999999995e-40  Caulobacter sp. K31  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008254  Meso_0857  methylmalonyl-CoA mutase  32.55 
 
 		 479 aa  165  3e-39  Chelativorans sp. BNC1  Bacteria  normal  0.315986  n/a   
 
 
-
 
NC_009720  Xaut_4729  methylmalonyl-CoA mutase  34.96 
 
 		 610 aa  162  3e-38  Xanthobacter autotrophicus Py2  Bacteria  normal  1  normal  0.376161 
 
 
-
 
NC_013235  Namu_5167  Methylmalonyl-CoA mutase  37.04 
 
 		 600 aa  158  3e-37  Nakamurella multipartita DSM 44233  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010581  Bind_2200  methylmalonyl-CoA mutase  30.17 
 
 		 624 aa  157  8e-37  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  1  normal  0.53913 
 
 
-
 
NC_008699  Noca_3545  methylmalonyl-CoA mutase  35.65 
 
 		 569 aa  153  1e-35  Nocardioides sp. JS614  Bacteria  normal  1  n/a   
 
 
-
 
NC_010571  Oter_3305  methylmalonyl-CoA mutase, large subunit  31.84 
 
 		 706 aa  152  2e-35  Opitutus terrae PB90-1  Bacteria  normal  0.457427  normal  1 
 
 
-
 
NC_009511  Swit_2891  methylmalonyl-CoA mutase  29.73 
 
 		 716 aa  141  3e-32  Sphingomonas wittichii RW1  Bacteria  normal  1  normal  0.17991 
 
 
-
 
NC_010814  Glov_3260  methylmalonyl-CoA mutase, large subunit  29.62 
 
 		 713 aa  138  4e-31  Geobacter lovleyi SZ  Bacteria  normal  1  n/a   
 
 
-
 
NC_009943  Dole_0079  methylmalonyl-CoA mutase  30.56 
 
 		 706 aa  136  9.999999999999999e-31  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.373309  n/a   
 
 
-
 
NC_008347  Mmar10_1120  methylmalonyl-CoA mutase  34.07 
 
 		 480 aa  135  1.9999999999999998e-30  Maricaulis maris MCS10  Bacteria  normal  1  normal  0.170859 
 
 
-
 
NC_008609  Ppro_1285  methylmalonyl-CoA mutase, large subunit  29 
 
 		 727 aa  135  3.9999999999999996e-30  Pelobacter propionicus DSM 2379  Bacteria  normal  0.238431  n/a   
 
 
-
 
NC_007794  Saro_0811  methylmalonyl-CoA mutase  30.35 
 
 		 714 aa  133  1.0000000000000001e-29  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.251875  n/a   
 
 
-
 
NC_008048  Sala_1221  methylmalonyl-CoA mutase  30.21 
 
 		 715 aa  133  1.0000000000000001e-29  Sphingopyxis alaskensis RB2256  Bacteria  normal  0.584735  normal  1 
 
 
-
 
NC_010524  Lcho_2697  methylmalonyl-CoA mutase  27.98 
 
 		 720 aa  132  3e-29  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.20812 
 
 
-
 
NC_007493  RSP_2192  methylmalonyl-CoA mutase  28.08 
 
 		 709 aa  131  5.0000000000000004e-29  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.172259  n/a   
 
 
-
 
NC_009049  Rsph17029_0867  methylmalonyl-CoA mutase  28.08 
 
 		 709 aa  130  7.000000000000001e-29  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.134958  normal  1 
 
 
-
 
NC_007948  Bpro_2161  methylmalonyl-CoA mutase  28.3 
 
 		 723 aa  130  1.0000000000000001e-28  Polaromonas sp. JS666  Bacteria  normal  0.385791  normal  0.481947 
 
 
-
 
NC_011988  Avi_5687  methylmalonyl-CoA mutase  29.54 
 
 		 712 aa  127  7e-28  Agrobacterium vitis S4  Bacteria  normal  1  n/a   
 
 
-
 
NC_009428  Rsph17025_2300  methylmalonyl-CoA mutase  28.21 
 
 		 709 aa  127  9e-28  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008687  Pden_3681  methylmalonyl-CoA mutase  28.82 
 
 		 714 aa  127  1e-27  Paracoccus denitrificans PD1222  Bacteria  normal  0.542374  normal  1 
 
 
-
 
NC_010002  Daci_3753  methylmalonyl-CoA mutase  27.21 
 
 		 738 aa  125  2e-27  Delftia acidovorans SPH-1  Bacteria  normal  0.801598  normal  0.879758 
 
 
-
 
NC_008752  Aave_2510  methylmalonyl-CoA mutase  27.13 
 
 		 722 aa  126  2e-27  Acidovorax citrulli AAC00-1  Bacteria  normal  1  normal  0.178476 
 
 
-
 
NC_008781  Pnap_2383  methylmalonyl-CoA mutase  27.64 
 
 		 718 aa  125  2e-27  Polaromonas naphthalenivorans CJ2  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012852  Rleg_6098  methylmalonyl-CoA mutase  28.63 
 
 		 712 aa  125  3e-27  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.23929  normal  0.554736 
 
 
-
 
NC_011992  Dtpsy_1849  methylmalonyl-CoA mutase  27.83 
 
 		 720 aa  125  3e-27  Acidovorax ebreus TPSY  Bacteria  normal  1  n/a   
 
 
-
 
NC_011353  ECH74115_4213  methylmalonyl-CoA mutase  29.52 
 
 		 714 aa  124  5e-27  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008782  Ajs_2040  methylmalonyl-CoA mutase  27.83 
 
 		 720 aa  124  5e-27  Acidovorax sp. JS42  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007908  Rfer_2805  methylmalonyl-CoA mutase  27.67 
 
 		 719 aa  124  6e-27  Rhodoferax ferrireducens T118  Bacteria  normal  0.147831  n/a   
 
 
-
 
NC_008025  Dgeo_1320  methylmalonyl-CoA mutase  29.59 
 
 		 722 aa  124  6e-27  Deinococcus geothermalis DSM 11300  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009719  Plav_1702  methylmalonyl-CoA mutase  27.31 
 
 		 718 aa  124  8e-27  Parvibaculum lavamentivorans DS-1  Bacteria  normal  1  normal  0.0321557 
 
 
-
 
NC_009800  EcHS_A3075  methylmalonyl-CoA mutase  29.32 
 
 		 714 aa  123  9e-27  Escherichia coli HS  Bacteria  normal  1  n/a   
 
 
-
 
NC_010498  EcSMS35_3053  methylmalonyl-CoA mutase  29.52 
 
 		 714 aa  123  9e-27  Escherichia coli SMS-3-5  Bacteria  normal  1  normal  1 
 
 
-
 
CP001509  ECD_02748  methylmalonyl-CoA mutase  29.32 
 
 		 714 aa  123  9.999999999999999e-27  Escherichia coli BL21(DE3)  Bacteria  normal  1  n/a   
 
 
-
 
CP001637  EcDH1_0776  methylmalonyl-CoA mutase, large subunit  29.32 
 
 		 714 aa  123  9.999999999999999e-27  Escherichia coli DH1  Bacteria  normal  1  n/a   
 
 
-
 
NC_010468  EcolC_0793  methylmalonyl-CoA mutase  29.32 
 
 		 714 aa  123  9.999999999999999e-27  Escherichia coli ATCC 8739  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009801  EcE24377A_3244  methylmalonyl-CoA mutase  29.31 
 
 		 714 aa  123  9.999999999999999e-27  Escherichia coli E24377A  Bacteria  normal  0.98625  n/a   
 
 
-
 
NC_012892  B21_02711  hypothetical protein  29.32 
 
 		 714 aa  123  9.999999999999999e-27  Escherichia coli BL21  Bacteria  normal  1  n/a   
 
 
-
 
NC_011371  Rleg2_6511  methylmalonyl-CoA mutase  27.6 
 
 		 712 aa  122  1.9999999999999998e-26  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  1  normal  1 
 
 
-
 
NC_004310  BR1190  methylmalonyl-CoA mutase  27.48 
 
 		 712 aa  122  3e-26  Brucella suis 1330  Bacteria  normal  0.942727  n/a   
 
 
-
 
NC_007802  Jann_3367  methylmalonyl-CoA mutase  29.14 
 
 		 709 aa  122  3e-26  Jannaschia sp. CCS1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012791  Vapar_2127  methylmalonyl-CoA mutase  27.42 
 
 		 720 aa  121  3.9999999999999996e-26  Variovorax paradoxus S110  Bacteria  normal  0.063815  n/a   
 
 
-
 
NC_007298  Daro_4006  methylmalonyl-CoA mutase  26.79 
 
 		 716 aa  120  9e-26  Dechloromonas aromatica RCB  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013132  Cpin_6260  methylmalonyl-CoA mutase, large subunit  26.61 
 
 		 517 aa  119  9.999999999999999e-26  Chitinophaga pinensis DSM 2588  Bacteria  normal  1  normal  0.593051 
 
 
-
 
NC_007760  Adeh_0259  methylmalonyl-CoA mutase  28.35 
 
 		 549 aa  120  9.999999999999999e-26  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.101753  n/a   
 
 
-
 
NC_011145  AnaeK_0270  methylmalonyl-CoA mutase, large subunit  28.15 
 
 		 549 aa  120  9.999999999999999e-26  Anaeromyxobacter sp. K  Bacteria  normal  1  n/a   
 
 
-
 
NC_011891  A2cp1_0281  methylmalonyl-CoA mutase, large subunit  27.93 
 
 		 549 aa  119  1.9999999999999998e-25  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  decreased coverage  0.0034305  n/a   
 
 
-
 
NC_011370  Rleg2_6136  methylmalonyl-CoA mutase  26.18 
 
 		 717 aa  119  1.9999999999999998e-25  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.0179109  normal  0.120378 
 
 
-
 
NC_009667  Oant_2001  methylmalonyl-CoA mutase  26.49 
 
 		 714 aa  118  3e-25  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  1  n/a   
 
 
-
 
NC_008825  Mpe_A1014  methylmalonyl-CoA mutase  27.39 
 
 		 719 aa  118  3.9999999999999997e-25  Methylibium petroleiphilum PM1  Bacteria  normal  1  normal  0.856859 
 
 
-
 
NC_009620  Smed_4237  methylmalonyl-CoA mutase  26.88 
 
 		 712 aa  118  5e-25  Sinorhizobium medicae WSM419  Bacteria  normal  1  normal  1 
 
 
-
 
CP001800  Ssol_0229  methylmalonyl-CoA mutase, large subunit  24.55 
 
 		 553 aa  117  6e-25  Sulfolobus solfataricus 98/2  Archaea  normal  1  n/a   
 
 
-
 
NC_011662  Tmz1t_3486  methylmalonyl-CoA mutase  27.39 
 
 		 721 aa  117  6.9999999999999995e-25  Thauera sp. MZ1T  Bacteria  normal  1  n/a   
 
 
-
 
NC_013730  Slin_6640  methylmalonyl-CoA mutase, large subunit  27.13 
 
 		 724 aa  117  6.9999999999999995e-25  Spirosoma linguale DSM 74  Bacteria  normal  1  normal  0.70273 
 
 
-
 
NC_009379  Pnuc_0910  methylmalonyl-CoA mutase  26.68 
 
 		 739 aa  117  6.9999999999999995e-25  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  0.736612  n/a   
 
 
-
 
NC_010531  Pnec_0932  methylmalonyl-CoA mutase  27.03 
 
 		 724 aa  117  7.999999999999999e-25  Polynucleobacter necessarius subsp. necessarius STIR1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007512  Plut_1291  methylmalonyl-CoA mutase  26.99 
 
 		 588 aa  117  8.999999999999998e-25  Chlorobium luteolum DSM 273  Bacteria  normal  1  normal  0.788589 
 
 
-
 
NC_009952  Dshi_0726  methylmalonyl-CoA mutase  28.61 
 
 		 712 aa  116  1.0000000000000001e-24  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.999011  normal  1 
 
 
-
 
NC_010655  Amuc_1983  methylmalonyl-CoA mutase  31 
 
 		 714 aa  116  1.0000000000000001e-24  Akkermansia muciniphila ATCC BAA-835  Bacteria  normal  0.774356  normal  0.0211504 
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>