More than 300 homologs were found in PanDaTox collection
for query gene Krad_3584 on replicon NC_009664
Organism: Kineococcus radiotolerans SRS30216



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009664  Krad_3584  short-chain dehydrogenase/reductase SDR  100 
 
 
227 aa  443  1e-123  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.0791624  normal  0.128025 
 
 
-
 
NC_013159  Svir_02630  short-chain alcohol dehydrogenase  56.02 
 
 
243 aa  239  2e-62  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.396729  normal 
 
 
-
 
NC_013093  Amir_6759  short-chain dehydrogenase/reductase SDR  59.46 
 
 
243 aa  236  2e-61  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_009565  TBFG_10492  short-chain type oxidoreductase  55.25 
 
 
251 aa  224  8e-58  Mycobacterium tuberculosis F11  Bacteria  normal  0.591118  normal 
 
 
-
 
NC_013595  Sros_0955  short-chain alcohol dehydrogenase of unknown specificity  53.54 
 
 
245 aa  218  5e-56  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_4228  short-chain dehydrogenase/reductase SDR  54.08 
 
 
254 aa  217  1e-55  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_0493  short-chain dehydrogenase/reductase SDR  54.42 
 
 
250 aa  214  5.9999999999999996e-55  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_0088  short-chain dehydrogenase/reductase SDR  49.33 
 
 
252 aa  213  9.999999999999999e-55  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_0825  short-chain dehydrogenase/reductase SDR  51.83 
 
 
252 aa  214  9.999999999999999e-55  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_013441  Gbro_0802  short-chain dehydrogenase/reductase SDR  52.07 
 
 
259 aa  213  1.9999999999999998e-54  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_2571  short-chain dehydrogenase/reductase SDR  53.51 
 
 
252 aa  210  2e-53  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.83336 
 
 
-
 
NC_008699  Noca_4052  short-chain dehydrogenase/reductase SDR  53.33 
 
 
248 aa  209  3e-53  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_0694  short-chain dehydrogenase/reductase SDR  51.93 
 
 
255 aa  207  1e-52  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013205  Aaci_0951  short-chain dehydrogenase/reductase SDR  51.95 
 
 
261 aa  206  2e-52  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_009077  Mjls_0648  short-chain dehydrogenase/reductase SDR  51.35 
 
 
251 aa  205  5e-52  Mycobacterium sp. JLS  Bacteria  normal  normal  0.410016 
 
 
-
 
NC_008146  Mmcs_0655  short-chain dehydrogenase/reductase SDR  51.8 
 
 
251 aa  205  5e-52  Mycobacterium sp. MCS  Bacteria  normal  0.196644  n/a   
 
 
-
 
NC_008705  Mkms_0668  short-chain dehydrogenase/reductase SDR  51.8 
 
 
251 aa  205  5e-52  Mycobacterium sp. KMS  Bacteria  normal  0.60736  normal 
 
 
-
 
NC_013757  Gobs_4610  short-chain dehydrogenase/reductase SDR  52.04 
 
 
261 aa  204  1e-51  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_013172  Bfae_09810  short-chain alcohol dehydrogenase  50 
 
 
261 aa  204  1e-51  Brachybacterium faecium DSM 4810  Bacteria  normal  0.0913042  n/a   
 
 
-
 
NC_013521  Sked_23940  short-chain alcohol dehydrogenase  51.75 
 
 
280 aa  202  2e-51  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.393654  normal  0.784232 
 
 
-
 
NC_013131  Caci_5927  short-chain dehydrogenase/reductase SDR  52.86 
 
 
248 aa  202  4e-51  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.142802 
 
 
-
 
NC_014158  Tpau_3139  short-chain dehydrogenase/reductase SDR  47.16 
 
 
251 aa  200  1.9999999999999998e-50  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.295469  n/a   
 
 
-
 
NC_014151  Cfla_1439  short-chain dehydrogenase/reductase SDR  54.19 
 
 
253 aa  199  1.9999999999999998e-50  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.659943  normal  0.282121 
 
 
-
 
NC_009380  Strop_0330  short-chain dehydrogenase/reductase SDR  53.19 
 
 
254 aa  198  5e-50  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_5952  short-chain dehydrogenase/reductase SDR  53.07 
 
 
250 aa  197  1.0000000000000001e-49  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.908331 
 
 
-
 
NC_009953  Sare_0397  short-chain dehydrogenase/reductase SDR  52.34 
 
 
254 aa  194  1e-48  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.00949223 
 
 
-
 
NC_007413  Ava_2888  Short-chain dehydrogenase/reductase SDR  43.53 
 
 
257 aa  187  1e-46  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.0119499 
 
 
-
 
NC_013530  Xcel_1145  short-chain dehydrogenase/reductase SDR  51.58 
 
 
264 aa  183  2.0000000000000003e-45  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_24130  short-chain alcohol dehydrogenase  47.83 
 
 
266 aa  181  6e-45  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.969986 
 
 
-
 
NC_006369  lpl0338  hypothetical protein  40.69 
 
 
257 aa  181  8.000000000000001e-45  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_014230  CA2559_04715  Short-chain dehydrogenase/reductase SDR  43.67 
 
 
249 aa  181  8.000000000000001e-45  Croceibacter atlanticus HTCC2559  Bacteria  normal  0.863639  n/a   
 
 
-
 
NC_006368  lpp0362  hypothetical protein  40.26 
 
 
257 aa  180  1e-44  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_011884  Cyan7425_1650  short-chain dehydrogenase/reductase SDR  44.59 
 
 
254 aa  179  4e-44  Cyanothece sp. PCC 7425  Bacteria  normal  0.206138  normal 
 
 
-
 
NC_013174  Jden_0207  short-chain dehydrogenase/reductase SDR  46.09 
 
 
262 aa  179  4e-44  Jonesia denitrificans DSM 20603  Bacteria  normal  normal 
 
 
-
 
NC_008541  Arth_2400  short-chain dehydrogenase/reductase SDR  45 
 
 
253 aa  177  8e-44  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_014248  Aazo_3599  short-chain dehydrogenase/reductase SDR  39.39 
 
 
256 aa  176  2e-43  'Nostoc azollae' 0708  Bacteria  normal  n/a   
 
 
-
 
NC_011886  Achl_2154  short-chain dehydrogenase/reductase SDR  45 
 
 
253 aa  172  2.9999999999999996e-42  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.00000000671935 
 
 
-
 
NC_013757  Gobs_3795  short-chain dehydrogenase/reductase SDR  44.93 
 
 
252 aa  169  3e-41  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.586754  n/a   
 
 
-
 
NC_009675  Anae109_1109  short-chain dehydrogenase/reductase SDR  46.85 
 
 
254 aa  167  9e-41  Anaeromyxobacter sp. Fw109-5  Bacteria  hitchhiker  0.00727999  normal  0.180483 
 
 
-
 
NC_007651  BTH_I1378  short chain dehydrogenase/reductase family oxidoreductase  43.91 
 
 
248 aa  165  6.9999999999999995e-40  Burkholderia thailandensis E264  Bacteria  normal  0.73447  n/a   
 
 
-
 
NC_008312  Tery_0205  short-chain dehydrogenase/reductase SDR  37.93 
 
 
257 aa  163  2.0000000000000002e-39  Trichodesmium erythraeum IMS101  Bacteria  normal  0.76225  normal  0.242071 
 
 
-
 
NC_008751  Dvul_1374  short-chain dehydrogenase/reductase SDR  43.72 
 
 
253 aa  163  2.0000000000000002e-39  Desulfovibrio vulgaris DP4  Bacteria  normal  0.542817  normal  0.89387 
 
 
-
 
NC_008060  Bcen_0322  short-chain dehydrogenase/reductase SDR  43.04 
 
 
248 aa  162  5.0000000000000005e-39  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008542  Bcen2424_0805  short-chain dehydrogenase/reductase SDR  43.04 
 
 
248 aa  162  5.0000000000000005e-39  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_013730  Slin_0085  short-chain dehydrogenase/reductase SDR  40.43 
 
 
250 aa  161  7e-39  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_010622  Bphy_2450  short-chain dehydrogenase/reductase SDR  43.04 
 
 
248 aa  160  1e-38  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_007643  Rru_A2127  Serine 3-dehydrogenase  41.63 
 
 
255 aa  160  1e-38  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.247906  n/a   
 
 
-
 
NC_007519  Dde_1841  short chain dehydrogenase/reductase family oxidoreductase  41.74 
 
 
250 aa  160  2e-38  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  hitchhiker  0.00165114  n/a   
 
 
-
 
NC_008390  Bamb_0682  short-chain dehydrogenase/reductase SDR  43.04 
 
 
248 aa  160  2e-38  Burkholderia ambifaria AMMD  Bacteria  normal  n/a   
 
 
-
 
NC_010508  Bcenmc03_0774  short-chain dehydrogenase/reductase SDR  42.61 
 
 
248 aa  159  3e-38  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.295991  normal 
 
 
-
 
NC_010551  BamMC406_0699  short-chain dehydrogenase/reductase SDR  42.17 
 
 
248 aa  159  3e-38  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_006348  BMA2076  short chain dehydrogenase/reductase family oxidoreductase  43.48 
 
 
248 aa  157  9e-38  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_3251  putative short-chain dehydrogenase  43.48 
 
 
248 aa  157  9e-38  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009080  BMA10247_1944  short chain dehydrogenase/reductase family oxidoreductase  43.48 
 
 
248 aa  157  9e-38  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_009076  BURPS1106A_3236  short chain dehydrogenase/reductase family oxidoreductase  43.48 
 
 
248 aa  157  9e-38  Burkholderia pseudomallei 1106a  Bacteria  normal  0.964469  n/a   
 
 
-
 
NC_008785  BMASAVP1_A0832  short chain dehydrogenase/reductase family oxidoreductase  43.48 
 
 
248 aa  157  9e-38  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_008836  BMA10229_A2666  short chain dehydrogenase/reductase family oxidoreductase  43.48 
 
 
248 aa  157  9e-38  Burkholderia mallei NCTC 10229  Bacteria  normal  0.99175  n/a   
 
 
-
 
NC_009074  BURPS668_3198  short chain dehydrogenase/reductase family oxidoreductase  43.48 
 
 
248 aa  157  9e-38  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_013061  Phep_0979  short-chain dehydrogenase/reductase SDR  36.96 
 
 
254 aa  157  2e-37  Pedobacter heparinus DSM 2366  Bacteria  normal  normal  0.495407 
 
 
-
 
NC_012803  Mlut_09940  short-chain alcohol dehydrogenase  46.67 
 
 
264 aa  156  2e-37  Micrococcus luteus NCTC 2665  Bacteria  normal  0.920602  n/a   
 
 
-
 
NC_013124  Afer_1363  short-chain dehydrogenase/reductase SDR  42.2 
 
 
250 aa  156  3e-37  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  n/a   
 
 
-
 
NC_013501  Rmar_0154  short-chain dehydrogenase/reductase SDR  41.38 
 
 
261 aa  154  1e-36  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_010084  Bmul_2582  short-chain dehydrogenase/reductase SDR  42.61 
 
 
248 aa  153  2e-36  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.445367  normal 
 
 
-
 
NC_009441  Fjoh_0713  short-chain dehydrogenase/reductase SDR  40.61 
 
 
251 aa  153  2e-36  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_002950  PG0676  short chain dehydrogenase/reductase family oxidoreductase  37.07 
 
 
253 aa  152  4e-36  Porphyromonas gingivalis W83  Bacteria  n/a    normal  0.153885 
 
 
-
 
NC_007912  Sde_0091  putative serine dehydrogenase  35.43 
 
 
252 aa  152  5e-36  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_011662  Tmz1t_0629  short-chain dehydrogenase/reductase SDR  42.61 
 
 
248 aa  151  5.9999999999999996e-36  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_007510  Bcep18194_A3894  Short-chain dehydrogenase/reductase SDR  42.17 
 
 
248 aa  152  5.9999999999999996e-36  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_013037  Dfer_3922  short-chain dehydrogenase/reductase SDR  38.7 
 
 
250 aa  151  7e-36  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal 
 
 
-
 
NC_009727  CBUD_0471  short chain dehydrogenase  35.53 
 
 
258 aa  151  8e-36  Coxiella burnetii Dugway 5J108-111  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_0398  short-chain dehydrogenase/reductase SDR  41.74 
 
 
267 aa  150  1e-35  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.110488 
 
 
-
 
BN001308  ANIA_00179  oxidoreductase, short chain dehydrogenase/reductase family (AFU_orthologue; AFUA_5G11240)  36.44 
 
 
313 aa  148  5e-35  Aspergillus nidulans FGSC A4  Eukaryota  normal  0.983253  normal 
 
 
-
 
NC_011146  Gbem_2261  short-chain dehydrogenase/reductase SDR  40.81 
 
 
254 aa  147  1.0000000000000001e-34  Geobacter bemidjiensis Bem  Bacteria  hitchhiker  0.00671569  n/a   
 
 
-
 
NC_008609  Ppro_2952  short-chain dehydrogenase/reductase SDR  38.1 
 
 
253 aa  147  1.0000000000000001e-34  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_010681  Bphyt_0764  short-chain dehydrogenase/reductase SDR  40 
 
 
248 aa  146  2.0000000000000003e-34  Burkholderia phytofirmans PsJN  Bacteria  normal  0.467056  normal  0.141575 
 
 
-
 
NC_011891  A2cp1_1198  short-chain dehydrogenase/reductase SDR  46.24 
 
 
254 aa  146  2.0000000000000003e-34  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_009068  PICST_52102  serine dehydrogenase  36.77 
 
 
271 aa  146  2.0000000000000003e-34  Scheffersomyces stipitis CBS 6054  Eukaryota  normal  normal 
 
 
-
 
NC_010117  COXBURSA331_A1696  short chain dehydrogenase/reductase family oxidoreductase  35.09 
 
 
258 aa  146  3e-34  Coxiella burnetii RSA 331  Bacteria  normal  0.817291  n/a   
 
 
-
 
NC_011894  Mnod_1405  short-chain dehydrogenase/reductase SDR  39.82 
 
 
256 aa  145  6e-34  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.565969  n/a   
 
 
-
 
NC_012918  GM21_1963  short-chain dehydrogenase/reductase SDR  40.36 
 
 
254 aa  144  1e-33  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_014150  Bmur_1122  short-chain dehydrogenase/reductase SDR  35.65 
 
 
258 aa  143  2e-33  Brachyspira murdochii DSM 12563  Bacteria  normal  0.0189644  n/a   
 
 
-
 
NC_011145  AnaeK_1129  short-chain dehydrogenase/reductase SDR  45.16 
 
 
254 aa  142  3e-33  Anaeromyxobacter sp. K  Bacteria  normal  0.402664  n/a   
 
 
-
 
NC_011094  SeSA_A1614  3-hydroxy acid dehydrogenase  38.26 
 
 
248 aa  142  6e-33  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.594866  normal 
 
 
-
 
NC_011083  SeHA_C1682  3-hydroxy acid dehydrogenase  38.26 
 
 
248 aa  141  8e-33  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  0.97667  normal 
 
 
-
 
NC_011149  SeAg_B1660  3-hydroxy acid dehydrogenase  38.26 
 
 
248 aa  141  8e-33  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  hitchhiker  0.00687336  n/a   
 
 
-
 
NC_011080  SNSL254_A1623  3-hydroxy acid dehydrogenase  38.26 
 
 
248 aa  141  8e-33  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal 
 
 
-
 
NC_011205  SeD_A1826  3-hydroxy acid dehydrogenase  38.26 
 
 
248 aa  141  8e-33  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.0315451  normal 
 
 
-
 
NC_012039  Cla_0971  oxidoreductase, short chain dehydrogenase/reductase family  34.68 
 
 
248 aa  141  9.999999999999999e-33  Campylobacter lari RM2100  Bacteria  normal  n/a   
 
 
-
 
NC_012560  Avin_30890  Short-chain dehydrogenase/reductase SDR protein  40.09 
 
 
252 aa  140  9.999999999999999e-33  Azotobacter vinelandii DJ  Bacteria  normal  0.972168  n/a   
 
 
-
 
NC_013132  Cpin_6941  short-chain dehydrogenase/reductase SDR  33.62 
 
 
251 aa  140  9.999999999999999e-33  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_0542  short-chain dehydrogenase/reductase SDR  36.32 
 
 
253 aa  140  9.999999999999999e-33  Pseudomonas putida W619  Bacteria  normal  normal  0.0795693 
 
 
-
 
NC_002939  GSU0197  short chain dehydrogenase/reductase family oxidoreductase  39.46 
 
 
254 aa  140  1.9999999999999998e-32  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_007963  Csal_0161  short-chain dehydrogenase/reductase SDR  39.82 
 
 
253 aa  139  3.9999999999999997e-32  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_012560  Avin_16870  glucose/ribitol dehydrogenase family protein  39.63 
 
 
254 aa  139  4.999999999999999e-32  Azotobacter vinelandii DJ  Bacteria  normal  0.494697  n/a   
 
 
-
 
NC_009436  Ent638_1939  3-hydroxy acid dehydrogenase  37.39 
 
 
248 aa  138  7e-32  Enterobacter sp. 638  Bacteria  normal  normal 
 
 
-
 
NC_007760  Adeh_1070  short-chain dehydrogenase/reductase SDR  43.09 
 
 
254 aa  138  7.999999999999999e-32  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_011365  Gdia_2896  short-chain dehydrogenase/reductase SDR  36.87 
 
 
252 aa  137  1e-31  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  0.0691773  normal  0.0221679 
 
 
-
 
NC_009379  Pnuc_0373  short-chain dehydrogenase/reductase SDR  37.18 
 
 
256 aa  137  1e-31  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  n/a   
 
 
-
 
NC_007951  Bxe_A3915  putative short-chain dehydrogenase/reductase SDR  39.29 
 
 
248 aa  136  2e-31  Burkholderia xenovorans LB400  Bacteria  normal  0.29888  normal  0.0896324 
 
 
-
 
NC_012917  PC1_2050  3-hydroxy acid dehydrogenase  38.7 
 
 
249 aa  136  2e-31  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.309895  n/a   
 
 
-
 
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