65 homologs were found in PanDaTox collection
for query gene Krad_0168 on replicon NC_009664
Organism: Kineococcus radiotolerans SRS30216



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009664  Krad_0168  putative anti-sigma regulatory factor, serine/threonine protein kinase  100 
 
 
149 aa  294  3e-79  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.129671  normal 
 
 
-
 
NC_009380  Strop_4515  hypothetical protein  42.86 
 
 
176 aa  74.3  0.0000000000006  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_0038  putative anti-sigma regulatory factor, serine/threonine protein kinase  41.53 
 
 
151 aa  72.4  0.000000000002  Thermobispora bispora DSM 43833  Bacteria  normal  0.536506  normal 
 
 
-
 
NC_013510  Tcur_0095  putative anti-sigma regulatory factor, serine/threonine protein kinase  38.17 
 
 
174 aa  68.9  0.00000000002  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_009953  Sare_5025  putative signal transduction histidine kinase  46.94 
 
 
166 aa  69.3  0.00000000002  Salinispora arenicola CNS-205  Bacteria  normal  0.239464  normal  0.0584008 
 
 
-
 
NC_013947  Snas_6464  ATP-binding region ATPase domain-containing protein  38.24 
 
 
164 aa  65.5  0.0000000002  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.675812 
 
 
-
 
NC_009921  Franean1_0664  putative anti-sigma regulatory factor, serine/threonine protein kinase  36.22 
 
 
147 aa  62.8  0.000000002  Frankia sp. EAN1pec  Bacteria  normal  normal  0.535186 
 
 
-
 
NC_014211  Ndas_5266  putative anti-sigma regulatory factor, serine/threonine protein kinase  34.64 
 
 
204 aa  60.5  0.000000008  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_0238  putative anti-sigma regulatory factor, serine/threonine protein kinase  36.8 
 
 
295 aa  57.4  0.00000006  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.112494 
 
 
-
 
NC_007777  Francci3_4051  putative serine/threonine kinase anti-sigma factor  34.43 
 
 
281 aa  56.2  0.0000001  Frankia sp. CcI3  Bacteria  normal  0.932154  normal 
 
 
-
 
NC_008578  Acel_2108  putative anti-sigma regulatory factor, serine/threonine protein kinase  37.07 
 
 
151 aa  54.7  0.0000004  Acidothermus cellulolyticus 11B  Bacteria  normal  normal  0.262944 
 
 
-
 
NC_013510  Tcur_3110  putative PAS/PAC sensor protein  36.07 
 
 
697 aa  53.5  0.000001  Thermomonospora curvata DSM 43183  Bacteria  normal  0.63551  n/a   
 
 
-
 
NC_007777  Francci3_0918  putative serine/threonine kinase anti-sigma factor  36.57 
 
 
142 aa  52.4  0.000002  Frankia sp. CcI3  Bacteria  normal  0.283269  normal 
 
 
-
 
NC_014210  Ndas_4151  putative signal transduction histidine kinase  36.29 
 
 
183 aa  52.4  0.000002  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_7294  putative anti-sigma regulatory factor, serine/threonine protein kinase  34.59 
 
 
161 aa  51.2  0.000005  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_8367  putative anti-sigma regulatory factor, serine/threonine protein kinase  33.33 
 
 
251 aa  50.8  0.000006  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_7843  putative anti-sigma regulatory factor, serine/threonine protein kinase  36.22 
 
 
137 aa  50.4  0.000008  Streptosporangium roseum DSM 43021  Bacteria  normal  0.5414  normal 
 
 
-
 
NC_014210  Ndas_0519  putative signal transduction histidine kinase  32.84 
 
 
165 aa  50.1  0.000009  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_0121  putative PAS/PAC sensor protein  36.8 
 
 
470 aa  50.1  0.00001  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.660456  normal  0.370084 
 
 
-
 
NC_007777  Francci3_3501  putative PAS/PAC sensor protein  38.02 
 
 
1225 aa  50.1  0.00001  Frankia sp. CcI3  Bacteria  normal  0.480314  normal  0.404449 
 
 
-
 
NC_009921  Franean1_5624  putative anti-sigma regulatory factor, serine/threonine protein kinase  41.25 
 
 
143 aa  49.3  0.00002  Frankia sp. EAN1pec  Bacteria  hitchhiker  0.000415643  normal 
 
 
-
 
NC_013510  Tcur_1416  putative anti-sigma regulatory factor, serine/threonine protein kinase  32.68 
 
 
151 aa  48.9  0.00002  Thermomonospora curvata DSM 43183  Bacteria  normal  0.034656  n/a   
 
 
-
 
NC_013510  Tcur_4525  putative anti-sigma regulatory factor, serine/threonine protein kinase  35.59 
 
 
130 aa  48.5  0.00003  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_0777  putative anti-sigma regulatory factor, serine/threonine protein kinase  32.5 
 
 
130 aa  48.1  0.00004  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.0574046  hitchhiker  0.00140169 
 
 
-
 
NC_009664  Krad_4080  protein serine phosphatase with GAF(s) sensor(s)  33.86 
 
 
738 aa  48.1  0.00004  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.32388  normal 
 
 
-
 
NC_007333  Tfu_2307  putative regulator  29.92 
 
 
181 aa  47.8  0.00005  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_8758  putative anti-sigma regulatory factor, serine/threonine protein kinase  34 
 
 
192 aa  47.8  0.00006  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_0374  putative anti-sigma regulatory factor, serine/threonine protein kinase  28.46 
 
 
248 aa  47.4  0.00007  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_0097  putative anti-sigma regulatory factor, serine/threonine protein kinase  36.22 
 
 
155 aa  47.4  0.00007  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.0115417  normal  0.062689 
 
 
-
 
NC_007333  Tfu_2295  hypothetical protein  35.09 
 
 
200 aa  47.4  0.00008  Thermobifida fusca YX  Bacteria  normal  0.147419  n/a   
 
 
-
 
NC_013595  Sros_3929  putative anti-sigma regulatory factor, serine/threonine protein kinase  30.51 
 
 
176 aa  47  0.00009  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0862817  hitchhiker  0.00846982 
 
 
-
 
NC_013131  Caci_7237  protein serine phosphatase with GAF(s) sensor(s)  32.2 
 
 
579 aa  46.6  0.0001  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_0104  putative anti-sigma regulatory factor, serine/threonine protein kinase  38.71 
 
 
141 aa  46.6  0.0001  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.141556  normal  0.0323603 
 
 
-
 
NC_007333  Tfu_1752  protein phosphatase 2C-like  31.15 
 
 
591 aa  45.8  0.0002  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_1233  putative anti-sigma regulatory factor, serine/threonine protein kinase  32.65 
 
 
151 aa  45.1  0.0003  Thermomonospora curvata DSM 43183  Bacteria  normal  0.226283  n/a   
 
 
-
 
NC_013131  Caci_6003  protein serine phosphatase with GAF(s) sensor(s)  30.22 
 
 
616 aa  45.1  0.0003  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.697266  normal  0.4865 
 
 
-
 
NC_013131  Caci_0743  putative PAS/PAC sensor protein  33.07 
 
 
855 aa  45.4  0.0003  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.565533 
 
 
-
 
NC_013595  Sros_6480  putative anti-sigma regulatory factor, serine/threonine protein kinase  33.58 
 
 
134 aa  45.1  0.0003  Streptosporangium roseum DSM 43021  Bacteria  normal  0.903724  normal  0.217215 
 
 
-
 
NC_014165  Tbis_1228  putative signal transduction histidine kinase  31.65 
 
 
169 aa  44.7  0.0004  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.141602 
 
 
-
 
NC_013510  Tcur_4370  putative signal transduction histidine kinase  35 
 
 
134 aa  45.1  0.0004  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_4034  putative anti-sigma regulatory factor, serine/threonine protein kinase  33.33 
 
 
129 aa  44.7  0.0004  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_3337  putative anti-sigma regulatory factor, serine/threonine protein kinase  30 
 
 
158 aa  44.3  0.0005  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_007333  Tfu_1739  PAS/protein phosphatase 2C-like  29.77 
 
 
817 aa  44.3  0.0006  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_007777  Francci3_2700  putative signal transduction histidine kinase  29.55 
 
 
207 aa  44.3  0.0006  Frankia sp. CcI3  Bacteria  normal  0.738661  normal  0.546363 
 
 
-
 
NC_013595  Sros_3148  putative anti-sigma regulatory factor, serine/threonine protein kinase  33.64 
 
 
146 aa  44.3  0.0006  Streptosporangium roseum DSM 43021  Bacteria  hitchhiker  0.00947281  normal 
 
 
-
 
NC_013510  Tcur_2086  putative anti-sigma regulatory factor, serine/threonine protein kinase  35.78 
 
 
134 aa  43.9  0.0008  Thermomonospora curvata DSM 43183  Bacteria  normal  0.019454  n/a   
 
 
-
 
NC_013510  Tcur_1448  putative anti-sigma regulatory factor, serine/threonine protein kinase  31.08 
 
 
164 aa  43.5  0.0009  Thermomonospora curvata DSM 43183  Bacteria  decreased coverage  0.0047791  n/a   
 
 
-
 
NC_007777  Francci3_0400  putative signal transduction histidine kinase  28.68 
 
 
203 aa  43.1  0.001  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_007333  Tfu_3056  putative regulatory protein  32.86 
 
 
160 aa  42.7  0.001  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_014165  Tbis_1173  putative anti-sigma regulatory factor, serine/threonine protein kinase  33.05 
 
 
180 aa  43.5  0.001  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_0305  putative anti-sigma regulatory factor, serine/threonine protein kinase  31.85 
 
 
184 aa  42.7  0.002  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.12283  normal  0.285434 
 
 
-
 
NC_013595  Sros_5629  putative signal transduction histidine kinase  32.38 
 
 
167 aa  42.7  0.002  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.56187 
 
 
-
 
NC_009664  Krad_1570  putative anti-sigma regulatory factor, serine/threonine protein kinase  34.78 
 
 
135 aa  42.4  0.002  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.196284  normal  0.153025 
 
 
-
 
NC_013757  Gobs_4668  ATP-binding region ATPase domain protein  31.71 
 
 
148 aa  42.7  0.002  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_007777  Francci3_2379  putative serine/threonine kinaseanti-sigma factor  33.33 
 
 
197 aa  42  0.003  Frankia sp. CcI3  Bacteria  normal  normal  0.084958 
 
 
-
 
NC_013510  Tcur_0429  putative anti-sigma regulatory factor, serine/threonine protein kinase  37.72 
 
 
196 aa  41.6  0.004  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_1003  protein serine phosphatase with GAF(s) sensor(s)  31.2 
 
 
549 aa  41.2  0.005  Kineococcus radiotolerans SRS30216  Bacteria  normal  decreased coverage  0.00204881 
 
 
-
 
NC_013510  Tcur_3632  ATP-binding region ATPase domain protein  33.63 
 
 
161 aa  41.2  0.005  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_014151  Cfla_0586  signal transduction histidine kinase, LytS  33.06 
 
 
123 aa  40.8  0.007  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0183303  hitchhiker  0.00998812 
 
 
-
 
NC_009664  Krad_0156  putative signal transduction histidine kinase  33.64 
 
 
132 aa  40.4  0.007  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.888783  normal  0.296506 
 
 
-
 
NC_009664  Krad_3741  putative anti-sigma regulatory factor, serine/threonine protein kinase  35.2 
 
 
133 aa  40.8  0.007  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.217317  normal  0.012325 
 
 
-
 
NC_013510  Tcur_4605  putative anti-sigma regulatory factor, serine/threonine protein kinase  34.38 
 
 
155 aa  40.8  0.007  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_2791  hypothetical protein  30.34 
 
 
395 aa  40.4  0.008  Geobacter bemidjiensis Bem  Bacteria  hitchhiker  0.0000237815  n/a   
 
 
-
 
NC_013131  Caci_7320  putative anti-sigma regulatory factor, serine/threonine protein kinase  31.62 
 
 
288 aa  40.4  0.008  Catenulispora acidiphila DSM 44928  Bacteria  hitchhiker  0.000252308  decreased coverage  0.00000000279842 
 
 
-
 
NC_014210  Ndas_4139  putative anti-sigma regulatory factor, serine/threonine protein kinase  28.28 
 
 
160 aa  40.4  0.009  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
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