12 homologs were found in PanDaTox collection
for query gene JJD26997_0845 on replicon NC_009707
Organism: Campylobacter jejuni subsp. doylei 269.97



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009707  JJD26997_0845  helix-turn-helix domain-containing protein  100 
 
 
188 aa  380  1e-105  Campylobacter jejuni subsp. doylei 269.97  Bacteria  hitchhiker  0.0000284644  n/a   
 
 
-
 
NC_013730  Slin_1142  transcriptional regulator, XRE family  31.88 
 
 
141 aa  43.9  0.001  Spirosoma linguale DSM 74  Bacteria  normal  0.343255  normal  0.597064 
 
 
-
 
NC_008265  CPR_C0038  Helix-turn-helix domain protein  31.43 
 
 
120 aa  43.5  0.002  Clostridium perfringens SM101  Bacteria  hitchhiker  0.000000109438  n/a   
 
 
-
 
NC_010627  Bphy_7416  hypothetical protein  32.43 
 
 
149 aa  42.7  0.003  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_013422  Hneap_1627  transcriptional regulator, XRE family  35.9 
 
 
135 aa  42.7  0.003  Halothiobacillus neapolitanus c2  Bacteria  hitchhiker  0.00124147  n/a   
 
 
-
 
NC_009253  Dred_0903  helix-turn-helix domain-containing protein  29.41 
 
 
255 aa  42  0.006  Desulfotomaculum reducens MI-1  Bacteria  unclonable  0.0000000193278  n/a   
 
 
-
 
NC_008009  Acid345_1539  MerR family transcriptional regulator  28.44 
 
 
292 aa  41.2  0.008  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.0172454  normal  0.655759 
 
 
-
 
NC_013440  Hoch_4304  transcriptional regulator, XRE family  25.32 
 
 
131 aa  41.2  0.008  Haliangium ochraceum DSM 14365  Bacteria  normal  normal  0.663644 
 
 
-
 
NC_013165  Shel_17550  putative transcriptional regulator with cupin domain  35.14 
 
 
200 aa  41.2  0.009  Slackia heliotrinireducens DSM 20476  Bacteria  normal  0.0466174  normal 
 
 
-
 
NC_013440  Hoch_4456  transcriptional regulator, XRE family  33.33 
 
 
147 aa  41.2  0.009  Haliangium ochraceum DSM 14365  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_4606  transcriptional regulator  30.65 
 
 
237 aa  41.2  0.01  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_013385  Adeg_1668  transcriptional regulator, XRE family  28.12 
 
 
256 aa  40.8  0.01  Ammonifex degensii KC4  Bacteria  hitchhiker  0.0000000231765  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>