87 homologs were found in PanDaTox collection
for query gene Hneap_0439 on replicon NC_013422
Organism: Halothiobacillus neapolitanus c2



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013422  Hneap_0439  histone family protein nucleoid-structuring protein H-NS  100 
 
 
107 aa  217  3.9999999999999997e-56  Halothiobacillus neapolitanus c2  Bacteria  decreased coverage  0.0000352276  n/a   
 
 
-
 
NC_007969  Pcryo_1957  histone-like nucleoid-structuring protein H-NS  40.57 
 
 
121 aa  82.8  0.000000000000002  Psychrobacter cryohalolentis K5  Bacteria  hitchhiker  0.00140882  normal 
 
 
-
 
NC_007801  Jann_4229  histone-like nucleoid-structuring protein H-NS  38.32 
 
 
108 aa  77  0.00000000000009  Jannaschia sp. CCS1  Bacteria  normal  0.289876  normal 
 
 
-
 
NC_009432  Rsph17025_4385  histone family protein nucleoid-structuring protein H-NS  39.25 
 
 
105 aa  73.6  0.0000000000009  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.0118502  normal  0.891502 
 
 
-
 
NC_008686  Pden_1545  histone family protein nucleoid-structuring protein H-NS  39.25 
 
 
105 aa  73.2  0.000000000001  Paracoccus denitrificans PD1222  Bacteria  normal  0.718681  normal  0.0365604 
 
 
-
 
NC_007802  Jann_0798  histone-like nucleoid-structuring protein H-NS  36.27 
 
 
119 aa  70.5  0.000000000006  Jannaschia sp. CCS1  Bacteria  normal  0.835916  normal 
 
 
-
 
NC_013421  Pecwa_1651  histone family protein nucleoid-structuring protein H-NS  34.95 
 
 
107 aa  69.3  0.00000000002  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_009952  Dshi_1024  histone family protein nucleoid-structuring protein H-NS  41.41 
 
 
105 aa  69.3  0.00000000002  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.0737742  normal  0.814079 
 
 
-
 
NC_007489  RSP_4056  histone-like nucleoid-structuring protein H-NS  33.64 
 
 
105 aa  68.6  0.00000000003  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_009430  Rsph17025_4162  hypothetical protein  32.71 
 
 
247 aa  67.8  0.00000000004  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
NC_010717  PXO_03185  DNA-binding protein  36.89 
 
 
153 aa  67  0.00000000008  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_009049  Rsph17029_0169  histone family protein nucleoid-structuring protein H-NS  34.62 
 
 
104 aa  66.2  0.0000000001  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal  0.485688 
 
 
-
 
NC_007493  RSP_1517  HNS family histone-like protein  34.62 
 
 
104 aa  66.2  0.0000000001  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.632748  n/a   
 
 
-
 
NC_009428  Rsph17025_2961  histone family protein nucleoid-structuring protein H-NS  34.62 
 
 
104 aa  65.9  0.0000000002  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal  0.0570093 
 
 
-
 
NC_008043  TM1040_3107  histone-like nucleoid-structuring protein H-NS  36.19 
 
 
106 aa  64.7  0.0000000004  Ruegeria sp. TM1040  Bacteria  normal  normal 
 
 
-
 
NC_008686  Pden_2782  histone family protein nucleoid-structuring protein H-NS  35.24 
 
 
102 aa  64.3  0.0000000005  Paracoccus denitrificans PD1222  Bacteria  normal  0.0983316  normal 
 
 
-
 
NC_008687  Pden_3156  histone family protein nucleoid-structuring protein H-NS  39.25 
 
 
105 aa  64.3  0.0000000005  Paracoccus denitrificans PD1222  Bacteria  normal  0.116532  normal  0.477373 
 
 
-
 
NC_008687  Pden_3349  histone family protein nucleoid-structuring protein H-NS  37.38 
 
 
105 aa  63.9  0.0000000007  Paracoccus denitrificans PD1222  Bacteria  normal  normal  0.340557 
 
 
-
 
NC_002977  MCA1863  regulator protein, putative  30.84 
 
 
112 aa  62.8  0.000000001  Methylococcus capsulatus str. Bath  Bacteria  unclonable  0.0000000371113  n/a   
 
 
-
 
NC_008340  Mlg_1986  histone family protein nucleoid-structuring protein H-NS  27.88 
 
 
105 aa  62.8  0.000000002  Alkalilimnicola ehrlichii MLHE-1  Bacteria  decreased coverage  0.000000114439  normal  0.0153833 
 
 
-
 
NC_011071  Smal_0526  histone family protein nucleoid-structuring protein H-NS  32.46 
 
 
127 aa  61.2  0.000000004  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal  0.280908 
 
 
-
 
NC_009430  Rsph17025_4136  hypothetical protein  35.85 
 
 
132 aa  60.1  0.00000001  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
NC_007298  Daro_2525  histone-like nucleoid-structuring protein H-NS  32.38 
 
 
105 aa  59.7  0.00000001  Dechloromonas aromatica RCB  Bacteria  decreased coverage  9.16284e-21  normal  0.0335348 
 
 
-
 
NC_007974  Rmet_3677  histone-like nucleoid-structuring protein H-NS  36.84 
 
 
102 aa  58.2  0.00000004  Cupriavidus metallidurans CH34  Bacteria  normal  normal  0.166379 
 
 
-
 
NC_007348  Reut_B5596  nucleoid protein H-NS  35.79 
 
 
102 aa  57  0.00000008  Ralstonia eutropha JMP134  Bacteria  normal  0.16143  n/a   
 
 
-
 
NC_010513  Xfasm12_1793  DNA-binding protein  31.15 
 
 
124 aa  56.6  0.0000001  Xylella fastidiosa M12  Bacteria  normal  n/a   
 
 
-
 
NC_010577  XfasM23_1726  histone family protein nucleoid-structuring protein H-NS  31.15 
 
 
124 aa  56.6  0.0000001  Xylella fastidiosa M23  Bacteria  normal  0.442577  n/a   
 
 
-
 
NC_007964  Nham_3069  histone-like nucleoid-structuring protein H-NS  31.62 
 
 
130 aa  55.5  0.0000003  Nitrobacter hamburgensis X14  Bacteria  normal  0.39515  n/a   
 
 
-
 
NC_007493  RSP_0002  histone-like nucleoid-structuring protein H-NS  30.77 
 
 
131 aa  55.5  0.0000003  Rhodobacter sphaeroides 2.4.1  Bacteria  hitchhiker  0.0049965  n/a   
 
 
-
 
NC_012855  Rpic12D_4934  histone family protein nucleoid-structuring protein H-NS  33.33 
 
 
103 aa  55.1  0.0000003  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_010678  Rpic_4238  histone family protein nucleoid-structuring protein H-NS  35.79 
 
 
102 aa  52.8  0.000001  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_012857  Rpic12D_4348  histone family protein nucleoid-structuring protein H-NS  35.79 
 
 
102 aa  52.8  0.000001  Ralstonia pickettii 12D  Bacteria  normal  normal  0.513312 
 
 
-
 
NC_003296  RS02604  putative HNS-like transcription regulator protein  35.79 
 
 
102 aa  53.1  0.000001  Ralstonia solanacearum GMI1000  Bacteria  hitchhiker  0.00414449  normal  0.0842767 
 
 
-
 
NC_007964  Nham_3068  histone-like nucleoid-structuring protein H-NS  30.25 
 
 
122 aa  53.1  0.000001  Nitrobacter hamburgensis X14  Bacteria  normal  0.280777  n/a   
 
 
-
 
NC_011071  Smal_3562  histone family protein nucleoid-structuring protein H-NS  32.17 
 
 
139 aa  52  0.000002  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.626821  normal  0.684238 
 
 
-
 
NC_011148  SeAg_A0019  H-NS histone family  33.33 
 
 
141 aa  52.4  0.000002  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  n/a    n/a   
 
 
-
 
NC_008789  Hhal_1489  histone family protein nucleoid-structuring protein H-NS  25 
 
 
115 aa  51.6  0.000003  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_007489  RSP_7372  H-NS family DNA-binding protein  30.09 
 
 
104 aa  52  0.000003  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_011662  Tmz1t_2060  histone family protein nucleoid-structuring protein H-NS  41.18 
 
 
91 aa  49.7  0.00001  Thauera sp. MZ1T  Bacteria  normal  0.0796579  n/a   
 
 
-
 
NC_012849  Rpic12D_5155  histone family protein nucleoid-structuring protein H-NS  37.5 
 
 
97 aa  47.4  0.00007  Ralstonia pickettii 12D  Bacteria  normal  0.336859  normal  0.425922 
 
 
-
 
NC_008825  Mpe_A1370  nucleoid protein H-NS  44.9 
 
 
115 aa  47  0.00009  Methylibium petroleiphilum PM1  Bacteria  normal  0.620152  normal 
 
 
-
 
NC_012912  Dd1591_2575  histone family protein nucleoid-structuring protein H-NS  37.61 
 
 
133 aa  45.8  0.0002  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_1152  histone family protein nucleoid-structuring protein H-NS  37.62 
 
 
133 aa  45.8  0.0002  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_1150  histone family protein nucleoid-structuring protein H-NS  31.25 
 
 
99 aa  45.8  0.0002  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_2738  histone-like nucleoid-structuring protein H-NS  25.45 
 
 
139 aa  45.8  0.0002  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.789792  normal 
 
 
-
 
NC_011992  Dtpsy_1065  histone family protein nucleoid-structuring protein H-NS  33.33 
 
 
98 aa  45.1  0.0004  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_1144  histone family protein nucleoid-structuring protein H-NS  33.33 
 
 
98 aa  45.1  0.0004  Acidovorax sp. JS42  Bacteria  normal  0.439674  normal  0.582774 
 
 
-
 
NC_009379  Pnuc_0838  histone family protein nucleoid-structuring protein H-NS  41.3 
 
 
94 aa  44.3  0.0006  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  n/a   
 
 
-
 
NC_010682  Rpic_1730  histone family protein nucleoid-structuring protein H-NS  42.37 
 
 
72 aa  44.3  0.0006  Ralstonia pickettii 12J  Bacteria  normal  0.386763  normal  0.64236 
 
 
-
 
NC_008789  Hhal_0441  histone family protein nucleoid-structuring protein H-NS  28.3 
 
 
124 aa  44.3  0.0006  Halorhodospira halophila SL1  Bacteria  normal  0.940607  n/a   
 
 
-
 
NC_008544  Bcen2424_6107  histone family protein nucleoid-structuring protein H-NS  31.37 
 
 
109 aa  43.9  0.0007  Burkholderia cenocepacia HI2424  Bacteria  normal  0.525668  normal 
 
 
-
 
NC_008062  Bcen_5743  histone-like nucleoid-structuring protein H-NS  31.37 
 
 
109 aa  43.9  0.0007  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_010512  Bcenmc03_6589  histone family protein nucleoid-structuring protein H-NS  31.37 
 
 
109 aa  43.9  0.0007  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.768318  normal  0.0573169 
 
 
-
 
NC_012791  Vapar_1795  histone family protein nucleoid-structuring protein H-NS  33.01 
 
 
114 aa  43.9  0.0008  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_009428  Rsph17025_2688  hypothetical protein  45.71 
 
 
110 aa  43.1  0.001  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.299941  normal 
 
 
-
 
NC_008781  Pnap_3493  histone family protein nucleoid-structuring protein H-NS  30.77 
 
 
113 aa  43.1  0.001  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.572012  normal  0.600215 
 
 
-
 
NC_009049  Rsph17029_2911  hypothetical protein  48.57 
 
 
92 aa  42.7  0.001  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_010623  Bphy_4285  histone family protein nucleoid-structuring protein H-NS  31.63 
 
 
97 aa  43.5  0.001  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_010515  Bcenmc03_4282  histone family protein nucleoid-structuring protein H-NS  31.82 
 
 
100 aa  43.1  0.001  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.0105949  normal  0.0174683 
 
 
-
 
NC_010087  Bmul_6044  histone family protein nucleoid-structuring protein H-NS  30.34 
 
 
116 aa  43.5  0.001  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal  0.304642 
 
 
-
 
NC_008752  Aave_2580  histone family protein nucleoid-structuring protein H-NS  33.82 
 
 
119 aa  42.4  0.002  Acidovorax citrulli AAC00-1  Bacteria  normal  0.122678  normal  0.024514 
 
 
-
 
NC_010086  Bmul_3806  histone family protein nucleoid-structuring protein H-NS  29.55 
 
 
100 aa  41.6  0.003  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.0101066  hitchhiker  0.00273603 
 
 
-
 
NC_008321  Shewmr4_1351  histone family protein nucleoid-structuring protein H-NS  28.7 
 
 
130 aa  42  0.003  Shewanella sp. MR-4  Bacteria  normal  0.0110439  hitchhiker  0.00767889 
 
 
-
 
NC_010524  Lcho_2290  histone family protein nucleoid-structuring protein H-NS  28 
 
 
112 aa  41.6  0.004  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_010552  BamMC406_4070  histone family protein nucleoid-structuring protein H-NS  34.55 
 
 
95 aa  41.6  0.004  Burkholderia ambifaria MC40-6  Bacteria  decreased coverage  0.000676326  normal 
 
 
-
 
NC_010557  BamMC406_6084  histone family protein nucleoid-structuring protein H-NS  37.88 
 
 
99 aa  41.6  0.004  Burkholderia ambifaria MC40-6  Bacteria  normal  0.78955  normal 
 
 
-
 
NC_009457  VC0395_A0700  DNA-binding protein VicH  38.89 
 
 
137 aa  41.6  0.004  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_008391  Bamb_3595  histone family protein nucleoid-structuring protein H-NS  34.55 
 
 
95 aa  41.6  0.004  Burkholderia ambifaria AMMD  Bacteria  normal  0.137974  normal 
 
 
-
 
NC_010681  Bphyt_0265  histone family protein nucleoid-structuring protein H-NS  27.55 
 
 
98 aa  41.6  0.004  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_008392  Bamb_6382  histone family protein nucleoid-structuring protein H-NS  37.88 
 
 
99 aa  41.2  0.005  Burkholderia ambifaria AMMD  Bacteria  normal  0.193522  normal  0.0275568 
 
 
-
 
NC_009092  Shew_2585  histone family protein nucleoid-structuring protein H-NS  26.05 
 
 
130 aa  41.2  0.005  Shewanella loihica PV-4  Bacteria  hitchhiker  0.000212728  normal 
 
 
-
 
NC_010087  Bmul_5655  histone family protein nucleoid-structuring protein H-NS  34.25 
 
 
128 aa  40.8  0.006  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_007509  Bcep18194_C7579  histone-like nucleoid-structuring protein H-NS  29.41 
 
 
109 aa  40.8  0.006  Burkholderia sp. 383  Bacteria  normal  0.54905  normal 
 
 
-
 
NC_011205  SeD_A2329  H-NS histone family protein  30.91 
 
 
134 aa  40.4  0.007  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.1305  hitchhiker  0.00000000912792 
 
 
-
 
NC_008758  Pnap_4578  histone family protein nucleoid-structuring protein H-NS  48.72 
 
 
121 aa  40.8  0.007  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_4071  histone family protein nucleoid-structuring protein H-NS  36.84 
 
 
95 aa  40.8  0.007  Delftia acidovorans SPH-1  Bacteria  normal  normal  0.0737815 
 
 
-
 
NC_010557  BamMC406_5851  histone family protein nucleoid-structuring protein H-NS  31.03 
 
 
109 aa  40.4  0.008  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_008392  Bamb_6089  histone family protein nucleoid-structuring protein H-NS  31.03 
 
 
109 aa  40.4  0.008  Burkholderia ambifaria AMMD  Bacteria  normal  0.817977  normal 
 
 
-
 
NC_009080  BMA10247_3109  H-NS histone family protein  30.53 
 
 
98 aa  40.4  0.009  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_009076  BURPS1106A_3943  H-NS histone family protein  30.53 
 
 
98 aa  40.4  0.009  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_009074  BURPS668_3862  H-NS histone family protein  30.53 
 
 
98 aa  40.4  0.009  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_0084  H-NS histone family protein  30.53 
 
 
98 aa  40.4  0.009  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_008836  BMA10229_A1677  H-NS histone family protein  30.53 
 
 
98 aa  40.4  0.009  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_008785  BMASAVP1_A3442  H-NS histone family protein  30.53 
 
 
98 aa  40.4  0.009  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_006348  BMA2867  H-NS histone family protein  30.53 
 
 
98 aa  40.4  0.009  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_007948  Bpro_3984  histone-like nucleoid-structuring protein H-NS  50 
 
 
117 aa  40  0.01  Polaromonas sp. JS666  Bacteria  normal  0.49889  normal  0.888803 
 
 
-
 
NC_004347  SO_3146  H-NS family DNA-binding protein  25.66 
 
 
130 aa  40  0.01  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
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