6 homologs were found in PanDaTox collection
for query gene Hlac_3116 on replicon NC_012028
Organism: Halorubrum lacusprofundi ATCC 49239



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_012028  Hlac_3116  zinc finger SWIM domain protein  100 
 
 
273 aa  555  1e-157  Halorubrum lacusprofundi ATCC 49239  Archaea  n/a    n/a   
 
 
-
 
NC_012028  Hlac_2999  zinc finger SWIM domain protein  73.26 
 
 
275 aa  419  1e-116  Halorubrum lacusprofundi ATCC 49239  Archaea  n/a    n/a   
 
 
-
 
NC_012028  Hlac_2838  hypothetical protein  62.64 
 
 
225 aa  339  2.9999999999999998e-92  Halorubrum lacusprofundi ATCC 49239  Archaea  n/a    n/a   
 
 
-
 
NC_013743  Htur_0156  zinc finger SWIM domain protein  48.78 
 
 
207 aa  61.6  0.00000001  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_013922  Nmag_1842  zinc finger SWIM domain protein  47.62 
 
 
220 aa  58.2  0.0000002  Natrialba magadii ATCC 43099  Archaea  decreased coverage  0.00570686  n/a   
 
 
-
 
NC_012029  Hlac_2531  zinc finger SWIM domain protein  42.37 
 
 
174 aa  43.9  0.003  Halorubrum lacusprofundi ATCC 49239  Archaea  normal  0.118725  normal  0.273454 
 
 
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