18 homologs were found in PanDaTox collection
for query gene HY04AAS1_1535 on replicon NC_011126
Organism: Hydrogenobaculum sp. Y04AAS1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011126  HY04AAS1_1535  ubiquinol-cytochrome c reductase cytochrome c1 subunit  100 
 
 
236 aa  488  1e-137  Hydrogenobaculum sp. Y04AAS1  Bacteria  hitchhiker  0.000000513902  n/a   
 
 
-
 
NC_013512  Sdel_1833  cytochrome c subfamily protein  35.35 
 
 
288 aa  65.5  0.0000000007  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  0.135185  n/a   
 
 
-
 
NC_013512  Sdel_0742  cytochrome c subfamily protein  35.35 
 
 
288 aa  65.5  0.0000000007  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  n/a   
 
 
-
 
NC_010730  SYO3AOP1_1455  cytochrome c class I  26.11 
 
 
278 aa  63.9  0.000000002  Sulfurihydrogenibium sp. YO3AOP1  Bacteria  hitchhiker  0.000000000371587  n/a   
 
 
-
 
NC_008787  CJJ81176_1199  ubiquinol--cytochrome c reductase, cytochrome c1 subunit  34 
 
 
374 aa  62.4  0.000000006  Campylobacter jejuni subsp. jejuni 81-176  Bacteria  normal  n/a   
 
 
-
 
NC_009707  JJD26997_0545  ubiquinol--cytochrome c reductase, cytochrome c1 subunit  34 
 
 
374 aa  62.4  0.000000006  Campylobacter jejuni subsp. doylei 269.97  Bacteria  normal  n/a   
 
 
-
 
NC_003912  CJE1318  ubiquinol--cytochrome c reductase, cytochrome c1 subunit  34 
 
 
374 aa  62.4  0.000000006  Campylobacter jejuni RM1221  Bacteria  normal  n/a   
 
 
-
 
NC_009802  CCC13826_1919  cytochrome c subfamily protein  20.08 
 
 
346 aa  56.2  0.0000005  Campylobacter concisus 13826  Bacteria  normal  n/a   
 
 
-
 
NC_009714  CHAB381_1236  ubiquinol--cytochrome c reductase, cytochrome c1 subunit  28.71 
 
 
367 aa  54.7  0.000001  Campylobacter hominis ATCC BAA-381  Bacteria  normal  n/a   
 
 
-
 
NC_008599  CFF8240_1450  ubiquinol--cytochrome c reductase, cytochrome c1 subunit  27.88 
 
 
341 aa  52  0.000009  Campylobacter fetus subsp. fetus 82-40  Bacteria  normal  0.20363  n/a   
 
 
-
 
NC_007575  Suden_1919  ubiquinol cytochrome c oxidoreductase, cytochrome C1 subunit  24.7 
 
 
315 aa  51.6  0.00001  Sulfurimonas denitrificans DSM 1251  Bacteria  hitchhiker  0.0000000233751  n/a   
 
 
-
 
NC_012039  Cla_1095  ubiquinol cytochrome c oxidoreductase, cytochrome c1 subunit  33.33 
 
 
375 aa  48.9  0.00007  Campylobacter lari RM2100  Bacteria  normal  n/a   
 
 
-
 
NC_009715  CCV52592_1816  hypothetical protein  25.22 
 
 
349 aa  46.2  0.0004  Campylobacter curvus 525.92  Bacteria  hitchhiker  0.000760007  n/a   
 
 
-
 
NC_011206  Lferr_2353  cytochrome c1  22.94 
 
 
233 aa  45.4  0.0007  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  0.922589  hitchhiker  0.000000000801731 
 
 
-
 
NC_011761  AFE_2731  ubiquinol--cytochrome c reductase, cytochrome c1 subunit  22.94 
 
 
233 aa  45.4  0.0007  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  0.0309003  n/a   
 
 
-
 
NC_006369  lpl2631  hypothetical protein  23.39 
 
 
246 aa  44.3  0.002  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_006368  lpp2758  hypothetical protein  21.21 
 
 
248 aa  43.9  0.002  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_010338  Caul_0703  cytochrome c1  27.08 
 
 
284 aa  43.1  0.004  Caulobacter sp. K31  Bacteria  normal  0.403643  normal 
 
 
-
 
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