25 homologs were found in PanDaTox collection
for query gene HS_1287 on replicon NC_008309
Organism: Haemophilus somnus 129PT



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008309  HS_1287  opacity associated protein A  100 
 
 
402 aa  810    Haemophilus somnus 129PT  Bacteria  hitchhiker  0.000000183549  n/a   
 
 
-
 
NC_013421  Pecwa_3587  Opacity-associated protein A  40.7 
 
 
237 aa  67.8  0.0000000003  Pectobacterium wasabiae WPP163  Bacteria  hitchhiker  0.000352842  n/a   
 
 
-
 
NC_012917  PC1_3430  Opacity-associated protein A  43.42 
 
 
237 aa  65.9  0.000000001  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  decreased coverage  0.000719849  n/a   
 
 
-
 
NC_012912  Dd1591_0779  Opacity-associated protein A  40.79 
 
 
234 aa  61.2  0.00000003  Dickeya zeae Ech1591  Bacteria  unclonable  0.0000149639  n/a   
 
 
-
 
NC_012880  Dd703_0799  Opacity-associated protein A  40 
 
 
239 aa  61.2  0.00000003  Dickeya dadantii Ech703  Bacteria  unclonable  0.000000409608  n/a   
 
 
-
 
NC_009708  YpsIP31758_3634  opacity-associated protein A  39.18 
 
 
246 aa  59.3  0.0000001  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_010465  YPK_3779  opacity-associated protein A  39.18 
 
 
246 aa  59.3  0.0000001  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_013456  VEA_001713  hypothetical protein  30 
 
 
198 aa  57.8  0.0000003  Vibrio sp. Ex25  Bacteria  hitchhiker  0.000000523038  n/a   
 
 
-
 
NC_009783  VIBHAR_00758  hypothetical protein  35.71 
 
 
250 aa  56.6  0.0000007  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_011080  SNSL254_A4756  opacity-associated protein A  29.76 
 
 
211 aa  56.2  0.000001  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  unclonable  0.0000275862  normal 
 
 
-
 
NC_011205  SeD_A4792  opacity-associated protein A  29.76 
 
 
211 aa  56.2  0.000001  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  unclonable  0.0000154437  normal 
 
 
-
 
NC_011149  SeAg_B4674  opacity-associated protein A  29.76 
 
 
211 aa  55.8  0.000001  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  hitchhiker  0.000000000152862  n/a   
 
 
-
 
NC_011094  SeSA_A4664  opacity-associated protein A  29.76 
 
 
211 aa  55.8  0.000001  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  unclonable  0.000000808092  normal 
 
 
-
 
NC_011083  SeHA_C4814  opacity-associated protein A  29.76 
 
 
211 aa  56.2  0.000001  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  unclonable  0.0000309624  normal 
 
 
-
 
NC_009436  Ent638_0376  opacity-associated protein A  27.71 
 
 
210 aa  55.1  0.000002  Enterobacter sp. 638  Bacteria  hitchhiker  0.0000862329  normal  0.148775 
 
 
-
 
CP001509  ECD_04078  predicted cell envelope opacity-associated protein  34.15 
 
 
212 aa  54.3  0.000003  Escherichia coli BL21(DE3)  Bacteria  decreased coverage  0.0000081403  n/a   
 
 
-
 
NC_011353  ECH74115_5723  opacity-associated family protein  30.63 
 
 
212 aa  54.7  0.000003  Escherichia coli O157:H7 str. EC4115  Bacteria  unclonable  0.00000000313576  normal 
 
 
-
 
NC_010468  EcolC_3800  opacity-associated protein A  34.15 
 
 
212 aa  54.3  0.000003  Escherichia coli ATCC 8739  Bacteria  unclonable  0.0000000303652  normal  0.850161 
 
 
-
 
NC_012892  B21_04041  hypothetical protein  34.15 
 
 
212 aa  54.3  0.000003  Escherichia coli BL21  Bacteria  decreased coverage  0.00000849189  n/a   
 
 
-
 
NC_009800  EcHS_A4456  opacity-associated family protein  34.15 
 
 
212 aa  54.7  0.000003  Escherichia coli HS  Bacteria  decreased coverage  2.92011e-19  n/a   
 
 
-
 
CP001637  EcDH1_3787  Opacity-associated protein A  34.15 
 
 
212 aa  54.7  0.000003  Escherichia coli DH1  Bacteria  decreased coverage  0.00000000000000889523  n/a   
 
 
-
 
NC_010498  EcSMS35_4683  opacity-associated family protein  35.37 
 
 
209 aa  53.1  0.000009  Escherichia coli SMS-3-5  Bacteria  decreased coverage  0.0000000121219  normal 
 
 
-
 
NC_010658  SbBS512_E4746  opacity-associated family protein  32.93 
 
 
212 aa  52.4  0.00001  Shigella boydii CDC 3083-94  Bacteria  unclonable  0.00000000000000152643  n/a   
 
 
-
 
NC_011312  VSAL_I0407  opacity-associated protein A  33.33 
 
 
220 aa  51.2  0.00003  Aliivibrio salmonicida LFI1238  Bacteria  unclonable  0.000035664  n/a   
 
 
-
 
NC_009832  Spro_0451  opacity-associated protein A  32.04 
 
 
224 aa  49.7  0.00009  Serratia proteamaculans 568  Bacteria  normal  0.543433  hitchhiker  0.00503504 
 
 
-
 
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