20 homologs were found in PanDaTox collection
for query gene HMPREF0424_1008 on replicon NC_013721
Organism: Gardnerella vaginalis 409-05



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013721  HMPREF0424_1008  pyridoxamine 5'-phosphate oxidase family protein  100 
 
 		 134 aa  277  5e-74  Gardnerella vaginalis 409-05  Bacteria  n/a    normal  1 
 
 
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NC_010816  BLD_0323  putative flavin-nucleotide-binding protein  76.12 
 
 		 139 aa  224  2e-58  Bifidobacterium longum DJO10A  Bacteria  normal  0.493786  n/a   
 
 
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NC_004116  SAG0422  hypothetical protein  37.5 
 
 		 129 aa  87.8  5e-17  Streptococcus agalactiae 2603V/R  Bacteria  normal  1  n/a   
 
 
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NC_008531  LEUM_0920  pyridoxine 5'-phosphate oxidase V related favin-nucleotide-binding protein  38.64 
 
 		 132 aa  82.8  0.000000000000001  Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293  Bacteria  hitchhiker  0.00810829  n/a   
 
 
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NC_008530  LGAS_0729  pyridoxine 5'-phosphate oxidase V related favin-nucleotide-binding protein  36.36 
 
 		 131 aa  69.3  0.00000000002  Lactobacillus gasseri ATCC 33323  Bacteria  normal  0.126242  normal  0.240214 
 
 
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NC_009712  Mboo_0293  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  33.83 
 
 		 132 aa  66.2  0.0000000001  Candidatus Methanoregula boonei 6A8  Archaea  normal  1  normal  1 
 
 
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NC_010085  Nmar_0576  pyridoxamine 5'-phosphate oxidase-related FMN-binding  28 
 
 		 148 aa  63.5  0.0000000009  Nitrosopumilus maritimus SCM1  Archaea  n/a    normal  1 
 
 
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NC_009635  Maeo_1125  pyridoxamine 5'-phosphate oxidase-related FMN-binding  26.28 
 
 		 136 aa  58.9  0.00000002  Methanococcus aeolicus Nankai-3  Archaea  normal  0.502995  n/a   
 
 
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NC_007644  Moth_1426  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  29.32 
 
 		 133 aa  57.8  0.00000005  Moorella thermoacetica ATCC 39073  Bacteria  unclonable  0.0000000000000163802  normal  0.0247628 
 
 
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NC_008553  Mthe_0783  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  21.36 
 
 		 151 aa  51.2  0.000005  Methanosaeta thermophila PT  Archaea  normal  0.409434  n/a   
 
 
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NC_008553  Mthe_1045  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  27.82 
 
 		 134 aa  49.7  0.00001  Methanosaeta thermophila PT  Archaea  normal  0.0950451  n/a   
 
 
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NC_011892  Mnod_8436  pyridoxamine 5'-phosphate oxidase-related FMN-binding  30.23 
 
 		 156 aa  46.6  0.0001  Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
-
 
NC_007949  Bpro_5176  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  27.27 
 
 		 335 aa  45.1  0.0003  Polaromonas sp. JS666  Bacteria  normal  1  normal  0.472651 
 
 
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NC_009051  Memar_0996  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  26.47 
 
 		 134 aa  44.7  0.0004  Methanoculleus marisnigri JR1  Archaea  normal  0.0213212  n/a   
 
 
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NC_007796  Mhun_0462  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  26.32 
 
 		 134 aa  45.1  0.0004  Methanospirillum hungatei JF-1  Archaea  normal  1  normal  0.191705 
 
 
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NC_009051  Memar_1441  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  24.06 
 
 		 134 aa  43.5  0.0009  Methanoculleus marisnigri JR1  Archaea  normal  0.109181  n/a   
 
 
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NC_007955  Mbur_1657  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  23.85 
 
 		 134 aa  43.1  0.001  Methanococcoides burtonii DSM 6242  Archaea  normal  1  n/a   
 
 
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NC_011832  Mpal_1577  pyridoxamine 5'-phosphate oxidase-related FMN-binding  23.31 
 
 		 134 aa  42.4  0.002  Methanosphaerula palustris E1-9c  Archaea  normal  0.188247  normal  1 
 
 
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NC_007355  Mbar_A3577  hypothetical protein  25.78 
 
 		 137 aa  40.8  0.006  Methanosarcina barkeri str. Fusaro  Archaea  normal  1  normal  0.179326 
 
 
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NC_009712  Mboo_1132  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  23.31 
 
 		 134 aa  40.4  0.009  Candidatus Methanoregula boonei 6A8  Archaea  normal  0.492287  normal  1 
 
 
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