11 homologs were found in PanDaTox collection
for query gene HMPREF0424_0718 on replicon NC_013721
Organism: Gardnerella vaginalis 409-05



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013721  HMPREF0424_0718  hypothetical protein  100 
 
 
97 aa  187  2.9999999999999997e-47  Gardnerella vaginalis 409-05  Bacteria  n/a    normal  0.423383 
 
 
-
 
NC_010816  BLD_0003  hypothetical protein  64.21 
 
 
96 aa  120  8e-27  Bifidobacterium longum DJO10A  Bacteria  normal  0.0151142  n/a   
 
 
-
 
NC_013174  Jden_2054  protein of unknown function DUF909  38.3 
 
 
96 aa  69.7  0.00000000001  Jonesia denitrificans DSM 20603  Bacteria  normal  0.0529736  normal 
 
 
-
 
NC_012803  Mlut_04110  hypothetical protein  37.23 
 
 
96 aa  64.3  0.0000000005  Micrococcus luteus NCTC 2665  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_3624  hypothetical protein  38.3 
 
 
96 aa  53.9  0.0000007  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.0367687  normal 
 
 
-
 
NC_012669  Bcav_0837  hypothetical protein  36.46 
 
 
96 aa  51.6  0.000003  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.712885  normal  0.155543 
 
 
-
 
NC_014151  Cfla_0714  protein of unknown function DUF909  40.86 
 
 
95 aa  50.8  0.000006  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.229811  hitchhiker  0.00000293243 
 
 
-
 
NC_009953  Sare_4441  hypothetical protein  30.95 
 
 
97 aa  46.6  0.0001  Salinispora arenicola CNS-205  Bacteria  normal  0.121424  hitchhiker  0.0086839 
 
 
-
 
NC_008541  Arth_0782  hypothetical protein  35.62 
 
 
95 aa  45.8  0.0002  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_011886  Achl_0897  protein of unknown function DUF909  37.68 
 
 
95 aa  44.7  0.0004  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  0.246035 
 
 
-
 
NC_009953  Sare_0930  hypothetical protein  32.91 
 
 
106 aa  41.2  0.005  Salinispora arenicola CNS-205  Bacteria  normal  normal 
 
 
-
 
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