More than 300 homologs were found in PanDaTox collection
for query gene HMPREF0424_0185 on replicon NC_013721
Organism: Gardnerella vaginalis 409-05



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013174  Jden_1262  glucose-6-phosphate 1-dehydrogenase  72.5 
 
 
513 aa  778    Jonesia denitrificans DSM 20603  Bacteria  normal  normal 
 
 
-
 
NC_013172  Bfae_15250  glucose-6-phosphate 1-dehydrogenase  71.68 
 
 
517 aa  748    Brachybacterium faecium DSM 4810  Bacteria  normal  0.10089  n/a   
 
 
-
 
NC_009664  Krad_2924  glucose-6-phosphate 1-dehydrogenase  74.8 
 
 
513 aa  764    Kineococcus radiotolerans SRS30216  Bacteria  normal  0.559692  normal 
 
 
-
 
NC_012669  Bcav_2163  glucose-6-phosphate 1-dehydrogenase  75.29 
 
 
508 aa  786    Beutenbergia cavernae DSM 12333  Bacteria  normal  0.153713  normal 
 
 
-
 
NC_012803  Mlut_11400  glucose-6-phosphate 1-dehydrogenase  65.58 
 
 
520 aa  707    Micrococcus luteus NCTC 2665  Bacteria  normal  0.178593  n/a   
 
 
-
 
NC_008726  Mvan_2718  glucose-6-phosphate 1-dehydrogenase  70.28 
 
 
509 aa  748    Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.838131  normal  0.152629 
 
 
-
 
NC_011886  Achl_1835  glucose-6-phosphate 1-dehydrogenase  70.89 
 
 
523 aa  761    Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.000000247882 
 
 
-
 
NC_013757  Gobs_2055  glucose-6-phosphate 1-dehydrogenase  64.42 
 
 
505 aa  659    Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_2210  glucose-6-phosphate 1-dehydrogenase  68.38 
 
 
507 aa  738    Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.00000230024  n/a   
 
 
-
 
NC_007333  Tfu_2005  glucose-6-phosphate 1-dehydrogenase  67.56 
 
 
534 aa  730    Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_2244  glucose-6-phosphate 1-dehydrogenase  70.69 
 
 
540 aa  748    Catenulispora acidiphila DSM 44928  Bacteria  normal  hitchhiker  0.0000605955 
 
 
-
 
NC_014165  Tbis_1983  glucose-6-phosphate 1-dehydrogenase  67.59 
 
 
529 aa  721    Thermobispora bispora DSM 43833  Bacteria  normal  0.1665  normal  0.69024 
 
 
-
 
NC_014151  Cfla_1936  glucose-6-phosphate 1-dehydrogenase  75.73 
 
 
513 aa  811    Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0192784  normal 
 
 
-
 
NC_013159  Svir_15950  glucose-6-phosphate 1-dehydrogenase  70.22 
 
 
509 aa  735    Saccharomonospora viridis DSM 43017  Bacteria  normal  0.0643236  normal  0.567165 
 
 
-
 
NC_013169  Ksed_13180  glucose-6-phosphate 1-dehydrogenase  70.16 
 
 
515 aa  712    Kytococcus sedentarius DSM 20547  Bacteria  normal  0.12336  normal 
 
 
-
 
NC_013947  Snas_2419  glucose-6-phosphate 1-dehydrogenase  61.76 
 
 
511 aa  648    Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.421958 
 
 
-
 
NC_009338  Mflv_3694  glucose-6-phosphate 1-dehydrogenase  68.63 
 
 
513 aa  733    Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_007777  Francci3_1647  glucose-6-phosphate 1-dehydrogenase  64.83 
 
 
510 aa  661    Frankia sp. CcI3  Bacteria  normal  0.336303  normal 
 
 
-
 
NC_009380  Strop_3092  glucose-6-phosphate 1-dehydrogenase  61.19 
 
 
505 aa  651    Salinispora tropica CNB-440  Bacteria  normal  normal  0.325189 
 
 
-
 
NC_013595  Sros_6016  Glucose-6-phosphate dehydrogenase  68.59 
 
 
545 aa  734    Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.558765 
 
 
-
 
NC_009921  Franean1_2073  glucose-6-phosphate 1-dehydrogenase  65.64 
 
 
510 aa  667    Frankia sp. EAN1pec  Bacteria  normal  0.398009  normal  0.0869756 
 
 
-
 
NC_013530  Xcel_1555  glucose-6-phosphate 1-dehydrogenase  76.63 
 
 
514 aa  816    Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_009077  Mjls_2452  glucose-6-phosphate 1-dehydrogenase  70.02 
 
 
523 aa  746    Mycobacterium sp. JLS  Bacteria  decreased coverage  0.00235023  normal 
 
 
-
 
NC_014210  Ndas_2976  glucose-6-phosphate 1-dehydrogenase  66.47 
 
 
517 aa  722    Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.925027  normal 
 
 
-
 
NC_008146  Mmcs_2412  glucose-6-phosphate 1-dehydrogenase  70.02 
 
 
523 aa  746    Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_19960  glucose-6-phosphate 1-dehydrogenase  78.46 
 
 
513 aa  825    Sanguibacter keddieii DSM 10542  Bacteria  normal  0.401043  normal 
 
 
-
 
NC_013093  Amir_5189  glucose-6-phosphate 1-dehydrogenase  70.47 
 
 
513 aa  751    Actinosynnema mirum DSM 43827  Bacteria  normal  0.663685  n/a   
 
 
-
 
NC_013721  HMPREF0424_0185  glucose-6-phosphate dehydrogenase  100 
 
 
526 aa  1080    Gardnerella vaginalis 409-05  Bacteria  n/a    normal 
 
 
-
 
NC_010816  BLD_1241  glucose-6-phosphate 1-dehydrogenase  86.22 
 
 
515 aa  924    Bifidobacterium longum DJO10A  Bacteria  normal  n/a   
 
 
-
 
NC_009565  TBFG_11475  glucose-6-phosphate 1-dehydrogenase  69.28 
 
 
514 aa  740    Mycobacterium tuberculosis F11  Bacteria  normal  0.0642944  normal  0.747487 
 
 
-
 
NC_013235  Namu_2260  glucose-6-phosphate 1-dehydrogenase  72.13 
 
 
516 aa  753    Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.000083899  normal  0.182304 
 
 
-
 
NC_014158  Tpau_2524  glucose-6-phosphate 1-dehydrogenase  69.01 
 
 
512 aa  711    Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_008541  Arth_2094  glucose-6-phosphate 1-dehydrogenase  71.29 
 
 
520 aa  767    Arthrobacter sp. FB24  Bacteria  normal  0.175031  n/a   
 
 
-
 
NC_013441  Gbro_2372  glucose-6-phosphate 1-dehydrogenase  69.63 
 
 
512 aa  741    Gordonia bronchialis DSM 43247  Bacteria  normal  0.340366  n/a   
 
 
-
 
NC_008578  Acel_1124  glucose-6-phosphate 1-dehydrogenase  72.55 
 
 
508 aa  775    Acidothermus cellulolyticus 11B  Bacteria  normal  decreased coverage  0.00734175 
 
 
-
 
NC_009953  Sare_3319  glucose-6-phosphate 1-dehydrogenase  62.18 
 
 
505 aa  664    Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.00190936 
 
 
-
 
NC_008699  Noca_2538  glucose-6-phosphate 1-dehydrogenase  69.28 
 
 
516 aa  712    Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_2458  glucose-6-phosphate 1-dehydrogenase  70.02 
 
 
523 aa  746    Mycobacterium sp. KMS  Bacteria  normal  0.230445  normal 
 
 
-
 
NC_011831  Cagg_3190  glucose-6-phosphate 1-dehydrogenase  51.47 
 
 
513 aa  531  1e-149  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal  0.767054 
 
 
-
 
NC_009523  RoseRS_2562  glucose-6-phosphate 1-dehydrogenase  50.3 
 
 
513 aa  520  1e-146  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_009767  Rcas_1852  glucose-6-phosphate 1-dehydrogenase  49.7 
 
 
518 aa  515  1.0000000000000001e-145  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.214037  normal  0.860492 
 
 
-
 
NC_009972  Haur_3021  glucose-6-phosphate 1-dehydrogenase  49.7 
 
 
508 aa  502  1e-141  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.0908495  n/a   
 
 
-
 
NC_011884  Cyan7425_3427  glucose-6-phosphate 1-dehydrogenase  47.56 
 
 
509 aa  488  1e-136  Cyanothece sp. PCC 7425  Bacteria  normal  0.349036  normal  0.556859 
 
 
-
 
NC_011726  PCC8801_3806  glucose-6-phosphate 1-dehydrogenase  47.86 
 
 
509 aa  482  1e-135  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013161  Cyan8802_3858  glucose-6-phosphate 1-dehydrogenase  47.86 
 
 
509 aa  482  1e-135  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_007604  Synpcc7942_2334  glucose-6-phosphate 1-dehydrogenase  47.53 
 
 
511 aa  477  1e-133  Synechococcus elongatus PCC 7942  Bacteria  normal  normal 
 
 
-
 
NC_008148  Rxyl_0051  glucose-6-phosphate 1-dehydrogenase  48.39 
 
 
510 aa  473  1e-132  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_013525  Tter_0413  glucose-6-phosphate 1-dehydrogenase  46.17 
 
 
514 aa  471  1.0000000000000001e-131  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_008312  Tery_0684  glucose-6-phosphate 1-dehydrogenase  45.74 
 
 
509 aa  468  9.999999999999999e-131  Trichodesmium erythraeum IMS101  Bacteria  normal  normal  0.10488 
 
 
-
 
NC_010571  Oter_3908  glucose-6-phosphate 1-dehydrogenase  47.6 
 
 
512 aa  457  1e-127  Opitutus terrae PB90-1  Bacteria  normal  0.313337  normal  0.337503 
 
 
-
 
NC_007413  Ava_1682  glucose-6-phosphate 1-dehydrogenase  44.94 
 
 
509 aa  452  1.0000000000000001e-126  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_011729  PCC7424_1498  glucose-6-phosphate 1-dehydrogenase  46.2 
 
 
509 aa  453  1.0000000000000001e-126  Cyanothece sp. PCC 7424  Bacteria  n/a    hitchhiker  0.0000000000000268393 
 
 
-
 
NC_014248  Aazo_1091  glucose-6-phosphate 1-dehydrogenase  44.47 
 
 
509 aa  449  1e-125  'Nostoc azollae' 0708  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_2421  glucose-6-phosphate 1-dehydrogenase  44.42 
 
 
503 aa  436  1e-121  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_1439  glucose-6-phosphate 1-dehydrogenase  44.62 
 
 
503 aa  436  1e-121  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.074785  n/a   
 
 
-
 
NC_008025  Dgeo_1974  glucose-6-phosphate 1-dehydrogenase  46.11 
 
 
560 aa  437  1e-121  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal  0.588725 
 
 
-
 
NC_011891  A2cp1_2508  glucose-6-phosphate 1-dehydrogenase  44.22 
 
 
501 aa  434  1e-120  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_2619  glucose-6-phosphate 1-dehydrogenase  45.03 
 
 
512 aa  434  1e-120  Geobacter metallireducens GS-15  Bacteria  normal  0.930273  normal 
 
 
-
 
NC_010320  Teth514_1417  glucose-6-phosphate 1-dehydrogenase  42.27 
 
 
485 aa  431  1e-119  Thermoanaerobacter sp. X514  Bacteria  normal  0.588108  n/a   
 
 
-
 
NC_007964  Nham_3271  glucose-6-phosphate 1-dehydrogenase  42.65 
 
 
504 aa  431  1e-119  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_009976  P9211_11141  glucose-6-phosphate 1-dehydrogenase  44.08 
 
 
507 aa  422  1e-117  Prochlorococcus marinus str. MIT 9211  Bacteria  normal  normal 
 
 
-
 
NC_007406  Nwi_2643  glucose-6-phosphate 1-dehydrogenase  42.65 
 
 
504 aa  424  1e-117  Nitrobacter winogradskyi Nb-255  Bacteria  normal  normal 
 
 
-
 
NC_008609  Ppro_2250  glucose-6-phosphate 1-dehydrogenase  43.37 
 
 
502 aa  424  1e-117  Pelobacter propionicus DSM 2379  Bacteria  hitchhiker  0.000181168  n/a   
 
 
-
 
NC_010003  Pmob_1133  glucose-6-phosphate 1-dehydrogenase  41.55 
 
 
520 aa  424  1e-117  Petrotoga mobilis SJ95  Bacteria  normal  n/a   
 
 
-
 
NC_009091  P9301_11811  glucose-6-phosphate 1-dehydrogenase  42.69 
 
 
507 aa  420  1e-116  Prochlorococcus marinus str. MIT 9301  Bacteria  normal  n/a   
 
 
-
 
NC_008009  Acid345_2812  glucose-6-phosphate 1-dehydrogenase  44.13 
 
 
514 aa  419  1e-116  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_008817  P9515_11641  glucose-6-phosphate 1-dehydrogenase  42.02 
 
 
507 aa  417  9.999999999999999e-116  Prochlorococcus marinus str. MIT 9515  Bacteria  normal  0.789994  n/a   
 
 
-
 
NC_008820  P9303_09401  glucose-6-phosphate 1-dehydrogenase  44.05 
 
 
507 aa  416  9.999999999999999e-116  Prochlorococcus marinus str. MIT 9303  Bacteria  n/a    normal  0.100308 
 
 
-
 
NC_008816  A9601_11801  glucose-6-phosphate 1-dehydrogenase  42.5 
 
 
507 aa  417  9.999999999999999e-116  Prochlorococcus marinus str. AS9601  Bacteria  normal  n/a   
 
 
-
 
NC_009675  Anae109_3326  glucose-6-phosphate 1-dehydrogenase  42.57 
 
 
505 aa  416  9.999999999999999e-116  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.0774281  normal 
 
 
-
 
NC_013037  Dfer_5182  glucose-6-phosphate 1-dehydrogenase  42.51 
 
 
502 aa  418  9.999999999999999e-116  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.875269  normal  0.100868 
 
 
-
 
NC_007577  PMT9312_1085  glucose-6-phosphate 1-dehydrogenase  42.72 
 
 
507 aa  413  1e-114  Prochlorococcus marinus str. MIT 9312  Bacteria  normal  0.620961  n/a   
 
 
-
 
NC_007958  RPD_3476  glucose-6-phosphate 1-dehydrogenase  41.25 
 
 
503 aa  413  1e-114  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.320789 
 
 
-
 
NC_009485  BBta_6317  glucose-6-phosphate 1-dehydrogenase  41.51 
 
 
507 aa  410  1e-113  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.510788  normal 
 
 
-
 
NC_010483  TRQ2_1661  glucose-6-phosphate 1-dehydrogenase  42.86 
 
 
496 aa  409  1e-113  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_3672  glucose-6-phosphate 1-dehydrogenase  40.85 
 
 
504 aa  411  1e-113  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_009436  Ent638_2421  glucose-6-phosphate 1-dehydrogenase  42.77 
 
 
491 aa  406  1.0000000000000001e-112  Enterobacter sp. 638  Bacteria  normal  0.576882  normal 
 
 
-
 
NC_007335  PMN2A_0676  glucose-6-phosphate 1-dehydrogenase  42.38 
 
 
507 aa  406  1.0000000000000001e-112  Prochlorococcus marinus str. NATL2A  Bacteria  normal  n/a   
 
 
-
 
NC_013132  Cpin_1481  glucose-6-phosphate 1-dehydrogenase  41.06 
 
 
501 aa  409  1.0000000000000001e-112  Chitinophaga pinensis DSM 2588  Bacteria  hitchhiker  0.0000384376  normal  0.373558 
 
 
-
 
NC_007778  RPB_1890  glucose-6-phosphate 1-dehydrogenase  41.31 
 
 
504 aa  408  1.0000000000000001e-112  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.414124  normal 
 
 
-
 
NC_008309  HS_1651  glucose-6-phosphate 1-dehydrogenase  43.23 
 
 
496 aa  406  1.0000000000000001e-112  Haemophilus somnus 129PT  Bacteria  normal  n/a   
 
 
-
 
NC_002620  TC0457  glucose-6-phosphate 1-dehydrogenase  42.8 
 
 
507 aa  402  1e-111  Chlamydia muridarum Nigg  Bacteria  unclonable  0.00414605  n/a   
 
 
-
 
NC_007484  Noc_2062  glucose-6-phosphate 1-dehydrogenase  41.18 
 
 
507 aa  403  1e-111  Nitrosococcus oceani ATCC 19707  Bacteria  normal  0.155375  n/a   
 
 
-
 
NC_013061  Phep_1675  glucose-6-phosphate 1-dehydrogenase  40.53 
 
 
503 aa  402  1e-111  Pedobacter heparinus DSM 2366  Bacteria  normal  normal 
 
 
-
 
NC_008819  NATL1_15091  glucose-6-phosphate 1-dehydrogenase  42.19 
 
 
507 aa  404  1e-111  Prochlorococcus marinus str. NATL1A  Bacteria  normal  normal 
 
 
-
 
NC_011899  Hore_16270  glucose-6-phosphate 1-dehydrogenase  40.37 
 
 
498 aa  404  1e-111  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_4157  glucose-6-phosphate 1-dehydrogenase  40.73 
 
 
504 aa  403  1e-111  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.173775  n/a   
 
 
-
 
NC_004578  PSPTO_3121  glucose-6-phosphate 1-dehydrogenase  42.46 
 
 
510 aa  400  9.999999999999999e-111  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.243821  n/a   
 
 
-
 
NC_007484  Noc_0772  glucose-6-phosphate 1-dehydrogenase  42.01 
 
 
490 aa  401  9.999999999999999e-111  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_007516  Syncc9605_1918  glucose-6-phosphate 1-dehydrogenase  43.77 
 
 
507 aa  400  9.999999999999999e-111  Synechococcus sp. CC9605  Bacteria  normal  0.691213  normal 
 
 
-
 
NC_007519  Dde_3471  glucose-6-phosphate 1-dehydrogenase  42.94 
 
 
513 aa  401  9.999999999999999e-111  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_012850  Rleg_0395  glucose-6-phosphate 1-dehydrogenase  43.29 
 
 
491 aa  402  9.999999999999999e-111  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.329299  normal  0.142992 
 
 
-
 
NC_011369  Rleg2_0363  glucose-6-phosphate 1-dehydrogenase  42.77 
 
 
491 aa  399  9.999999999999999e-111  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.146846 
 
 
-
 
NC_014148  Plim_1200  glucose-6-phosphate 1-dehydrogenase  42 
 
 
522 aa  402  9.999999999999999e-111  Planctomyces limnophilus DSM 3776  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_6708  glucose-6-phosphate 1-dehydrogenase  42.49 
 
 
507 aa  397  1e-109  Methylobacterium sp. 4-46  Bacteria  normal  0.0735699  normal 
 
 
-
 
NC_011205  SeD_A1362  glucose-6-phosphate 1-dehydrogenase  41.77 
 
 
491 aa  397  1e-109  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.611238  hitchhiker  0.0000316111 
 
 
-
 
NC_007644  Moth_2302  glucose-6-phosphate 1-dehydrogenase  44.9 
 
 
504 aa  397  1e-109  Moorella thermoacetica ATCC 39073  Bacteria  decreased coverage  0.00258738  normal 
 
 
-
 
NC_009486  Tpet_1595  glucose-6-phosphate 1-dehydrogenase  41.9 
 
 
496 aa  395  1e-109  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_008228  Patl_0970  glucose-6-phosphate 1-dehydrogenase  41 
 
 
496 aa  397  1e-109  Pseudoalteromonas atlantica T6c  Bacteria  normal  0.149525  n/a   
 
 
-
 
NC_011080  SNSL254_A2045  glucose-6-phosphate 1-dehydrogenase  41.77 
 
 
491 aa  397  1e-109  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal  0.465768 
 
 
-
 
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