10 homologs were found in PanDaTox collection
for query gene Gura_3993 on replicon NC_009483
Organism: Geobacter uraniireducens Rf4



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009483  Gura_3993  hypothetical protein  100 
 
 
141 aa  290  6e-78  Geobacter uraniireducens Rf4  Bacteria  unclonable  0.0000000000520156  n/a   
 
 
-
 
NC_008609  Ppro_1069  appr-1-p processing domain-containing protein  64.29 
 
 
147 aa  195  2.0000000000000003e-49  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU2376  hypothetical protein  65 
 
 
142 aa  192  2e-48  Geobacter sulfurreducens PCA  Bacteria  normal  0.0220429  n/a   
 
 
-
 
NC_010814  Glov_0421  hypothetical protein  57.86 
 
 
146 aa  177  5.999999999999999e-44  Geobacter lovleyi SZ  Bacteria  normal  0.0143355  n/a   
 
 
-
 
NC_007498  Pcar_1357  hypothetical protein  59.29 
 
 
145 aa  176  8e-44  Pelobacter carbinolicus DSM 2380  Bacteria  normal  0.594443  n/a   
 
 
-
 
NC_011662  Tmz1t_3594  Appr-1-p processing domain protein  27.27 
 
 
351 aa  48.9  0.00003  Thauera sp. MZ1T  Bacteria  decreased coverage  0.000000210462  n/a   
 
 
-
 
NC_012912  Dd1591_0936  Appr-1-p processing domain protein  25.37 
 
 
349 aa  44.3  0.0006  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_007404  Tbd_1489  Appr-1-p processing protein  30.77 
 
 
331 aa  42.4  0.002  Thiobacillus denitrificans ATCC 25259  Bacteria  decreased coverage  0.000625886  normal 
 
 
-
 
NC_011901  Tgr7_0142  hypothetical protein  48.78 
 
 
158 aa  42.7  0.002  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.535098  n/a   
 
 
-
 
NC_013235  Namu_2730  Appr-1-p processing domain protein  31.71 
 
 
163 aa  40.4  0.009  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.000300309  hitchhiker  0.00298668 
 
 
-
 
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