More than 300 homologs were found in PanDaTox collection
for query gene Gura_1885 on replicon NC_009483
Organism: Geobacter uraniireducens Rf4



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_002939  GSU1657  DNA internalization-related competence protein ComEC/Rec2  50.13 
 
 
771 aa  688    Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_1885  DNA internalization-related competence protein ComEC/Rec2  100 
 
 
797 aa  1587    Geobacter uraniireducens Rf4  Bacteria  normal  0.372915  n/a   
 
 
-
 
NC_007517  Gmet_1915  DNA internalization-related competence protein ComEC/Rec2  52.41 
 
 
798 aa  767    Geobacter metallireducens GS-15  Bacteria  normal  hitchhiker  0.00143186 
 
 
-
 
NC_011146  Gbem_3098  DNA internalization-related competence protein ComEC/Rec2  48.09 
 
 
811 aa  627  1e-178  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_1164  DNA internalization-related competence protein ComEC/Rec2  49.67 
 
 
777 aa  614  9.999999999999999e-175  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.00428726 
 
 
-
 
NC_008609  Ppro_1379  DNA internalization-related competence protein ComEC/Rec2  41.67 
 
 
808 aa  545  1e-154  Pelobacter propionicus DSM 2379  Bacteria  normal  0.011467  n/a   
 
 
-
 
NC_010814  Glov_1759  DNA internalization-related competence protein ComEC/Rec2  42.3 
 
 
814 aa  528  1e-148  Geobacter lovleyi SZ  Bacteria  normal  0.0611654  n/a   
 
 
-
 
NC_009943  Dole_0767  DNA internalization-related competence protein ComEC/Rec2  31.95 
 
 
840 aa  335  2e-90  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_2510  DNA internalization-related competence protein ComEC/Rec2  31.01 
 
 
794 aa  292  2e-77  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_007498  Pcar_1043  DNA internalization-related competence protein ComEC/Rec2  30.98 
 
 
785 aa  264  4.999999999999999e-69  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_009012  Cthe_0606  DNA internalization-related competence protein ComEC/Rec2  28.33 
 
 
778 aa  257  6e-67  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_1716  DNA internalization-related competence protein ComEC/Rec2  28.47 
 
 
846 aa  255  2.0000000000000002e-66  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.116279  normal  0.782454 
 
 
-
 
NC_008346  Swol_1595  DNA internalization-related competence protein ComEC/Rec2  31.28 
 
 
761 aa  250  6e-65  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  n/a   
 
 
-
 
NC_010424  Daud_2070  DNA internalization-related competence protein ComEC/Rec2  31.11 
 
 
818 aa  244  3.9999999999999997e-63  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
NC_010320  Teth514_2092  DNA internalization-related competence protein ComEC/Rec2  29.43 
 
 
757 aa  241  5e-62  Thermoanaerobacter sp. X514  Bacteria  unclonable  0.000000797686  n/a   
 
 
-
 
NC_009455  DehaBAV1_0023  DNA internalization-related competence protein ComEC/Rec2  27.68 
 
 
796 aa  239  2e-61  Dehalococcoides sp. BAV1  Bacteria  normal  n/a   
 
 
-
 
NC_013552  DhcVS_23  DNA internalization competence protein  27.5 
 
 
795 aa  234  7.000000000000001e-60  Dehalococcoides sp. VS  Bacteria  normal  0.0107142  n/a   
 
 
-
 
NC_002936  DET0024  DNA internalization-related competence protein ComEC/Rec2  26.97 
 
 
795 aa  228  2e-58  Dehalococcoides ethenogenes 195  Bacteria  normal  0.0591884  n/a   
 
 
-
 
NC_013173  Dbac_1806  DNA internalization-related competence protein ComEC/Rec2  28.9 
 
 
804 aa  227  5.0000000000000005e-58  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_008009  Acid345_0140  DNA internalization-related competence protein ComEC/Rec2  29.1 
 
 
868 aa  226  1e-57  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  hitchhiker  0.0038467 
 
 
-
 
NC_011898  Ccel_1955  DNA internalization-related competence protein ComEC/Rec2  27.75 
 
 
786 aa  225  2e-57  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_007644  Moth_0575  DNA internalization-related competence protein ComEC/Rec2  31.25 
 
 
809 aa  225  3e-57  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal 
 
 
-
 
NC_013216  Dtox_3303  DNA internalization-related competence protein ComEC/Rec2  28.92 
 
 
789 aa  223  9.999999999999999e-57  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.78547  normal 
 
 
-
 
NC_011899  Hore_12920  DNA internalization-related competence protein ComEC/Rec2  27.32 
 
 
775 aa  220  7e-56  Halothermothrix orenii H 168  Bacteria  hitchhiker  0.00000000012809  n/a   
 
 
-
 
NC_010718  Nther_1173  DNA internalization-related competence protein ComEC/Rec2  27.77 
 
 
750 aa  218  4e-55  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  hitchhiker  0.00434485  hitchhiker  0.000212306 
 
 
-
 
NC_010184  BcerKBAB4_4176  DNA internalization-related competence protein ComEC/Rec2  28.09 
 
 
773 aa  212  2e-53  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_013385  Adeg_1483  DNA internalization-related competence protein ComEC/Rec2  28.5 
 
 
791 aa  211  6e-53  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_012793  GWCH70_2449  DNA internalization-related competence protein ComEC/Rec2  28.48 
 
 
759 aa  206  1e-51  Geobacillus sp. WCH70  Bacteria  normal  0.327807  n/a   
 
 
-
 
NC_011658  BCAH187_A4458  DNA internalization-related competence protein ComEC/Rec2  26.89 
 
 
773 aa  205  3e-51  Bacillus cereus AH187  Bacteria  hitchhiker  0.00283851  n/a   
 
 
-
 
NC_011662  Tmz1t_1990  DNA internalization-related competence protein ComEC/Rec2  29.64 
 
 
835 aa  204  5e-51  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_4406  DNA internalization-related competence protein ComEC/Rec2  26.5 
 
 
773 aa  203  9.999999999999999e-51  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_012034  Athe_1921  DNA internalization-related competence protein ComEC/Rec2  26.45 
 
 
752 aa  202  1.9999999999999998e-50  Anaerocellum thermophilum DSM 6725  Bacteria  hitchhiker  0.00848355  n/a   
 
 
-
 
NC_009675  Anae109_2499  DNA internalization-related competence protein ComEC/Rec2  28.22 
 
 
783 aa  196  2e-48  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  hitchhiker  0.00304772 
 
 
-
 
NC_007614  Nmul_A2506  DNA internalization-related competence protein ComEC/Rec2  26.45 
 
 
766 aa  193  1e-47  Nitrosospira multiformis ATCC 25196  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK4071  DNA internalization-related competence protein  26.39 
 
 
773 aa  191  7e-47  Bacillus cereus E33L  Bacteria  normal  0.499181  n/a   
 
 
-
 
NC_008576  Mmc1_0600  DNA internalization-related competence protein ComEC/Rec2  26.8 
 
 
815 aa  190  7e-47  Magnetococcus sp. MC-1  Bacteria  normal  normal  0.404851 
 
 
-
 
NC_011772  BCG9842_B0792  DNA internalization-related competence protein ComEC/Rec2  26.55 
 
 
773 aa  188  3e-46  Bacillus cereus G9842  Bacteria  normal  0.92497  hitchhiker  0.0000000434572 
 
 
-
 
NC_013223  Dret_0764  DNA internalization-related competence protein ComEC/Rec2  27.92 
 
 
811 aa  187  4e-46  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal  0.804759 
 
 
-
 
NC_011773  BCAH820_4347  DNA internalization-related competence protein ComEC/Rec2  26.55 
 
 
654 aa  185  3e-45  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.0000000320337 
 
 
-
 
NC_005957  BT9727_4061  DNA internalization-related competence protein ComEC/Rec2  26.39 
 
 
773 aa  185  4.0000000000000006e-45  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_009674  Bcer98_3051  DNA internalization-related competence protein ComEC/Rec2  25.46 
 
 
780 aa  184  6e-45  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.755952  n/a   
 
 
-
 
NC_011725  BCB4264_A4445  DNA internalization-related competence protein ComEC/Rec2  25.88 
 
 
773 aa  181  4.999999999999999e-44  Bacillus cereus B4264  Bacteria  normal  0.0495736  n/a   
 
 
-
 
NC_005945  BAS4223  DNA internalization-related competence protein ComEC/Rec2  26.39 
 
 
772 aa  179  1e-43  Bacillus anthracis str. Sterne  Bacteria  normal  0.396559  n/a   
 
 
-
 
NC_007530  GBAA_4551  DNA internalization-related competence protein ComEC/Rec2  26.39 
 
 
772 aa  179  1e-43  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.76471  n/a   
 
 
-
 
NC_013422  Hneap_1429  DNA internalization-related competence protein ComEC/Rec2  26.87 
 
 
840 aa  167  9e-40  Halothiobacillus neapolitanus c2  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_1002  DNA internalization-related competence protein ComEC/Rec2  26.55 
 
 
749 aa  166  1.0000000000000001e-39  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_002976  SERP1155  competence protein ComEC/Rec2, putative  26.37 
 
 
738 aa  166  2.0000000000000002e-39  Staphylococcus epidermidis RP62A  Bacteria  normal  0.889631  n/a   
 
 
-
 
NC_003910  CPS_2124  DNA internalization-related competence protein ComEC/Rec2  24.84 
 
 
860 aa  162  2e-38  Colwellia psychrerythraea 34H  Bacteria  normal  0.118158  n/a   
 
 
-
 
NC_007644  Moth_1254  Beta-lactamase-like  37.31 
 
 
348 aa  161  4e-38  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.104793  normal  0.017013 
 
 
-
 
NC_007484  Noc_2672  DNA internalization-related competence protein ComEC/Rec2  26.24 
 
 
784 aa  160  9e-38  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_007973  Rmet_1043  DNA internalization-related competence protein ComEC/Rec2  25.9 
 
 
851 aa  157  6e-37  Cupriavidus metallidurans CH34  Bacteria  normal  normal  0.605949 
 
 
-
 
NC_010084  Bmul_1159  DNA internalization-related competence protein ComEC/Rec2  27.73 
 
 
819 aa  157  1e-36  Burkholderia multivorans ATCC 17616  Bacteria  normal  hitchhiker  0.00785752 
 
 
-
 
NC_007947  Mfla_2093  DNA internalization-related competence protein ComEC/Rec2  25.32 
 
 
802 aa  156  1e-36  Methylobacillus flagellatus KT  Bacteria  normal  0.35183  normal 
 
 
-
 
NC_002977  MCA2627  DNA internalization-related competence protein ComEC/Rec2  26.53 
 
 
801 aa  155  2e-36  Methylococcus capsulatus str. Bath  Bacteria  normal  n/a   
 
 
-
 
NC_008825  Mpe_A2554  putative transporter DNA uptake transmembrane protein  27.53 
 
 
846 aa  155  2.9999999999999998e-36  Methylibium petroleiphilum PM1  Bacteria  normal  normal 
 
 
-
 
NC_013171  Apre_1186  DNA internalization-related competence protein ComEC/Rec2  23.58 
 
 
722 aa  155  2.9999999999999998e-36  Anaerococcus prevotii DSM 20548  Bacteria  normal  0.41344  n/a   
 
 
-
 
NC_007912  Sde_1702  DNA internalization-related competence protein ComEC/Rec2  25.39 
 
 
839 aa  154  5.9999999999999996e-36  Saccharophagus degradans 2-40  Bacteria  normal  normal  0.0283023 
 
 
-
 
NC_014148  Plim_2474  ComEC/Rec2-related protein  25.72 
 
 
879 aa  152  2e-35  Planctomyces limnophilus DSM 3776  Bacteria  normal  0.672876  n/a   
 
 
-
 
NC_008261  CPF_1910  metallo-beta-lactamase family protein  35.94 
 
 
284 aa  151  4e-35  Clostridium perfringens ATCC 13124  Bacteria  normal  0.404298  n/a   
 
 
-
 
NC_012856  Rpic12D_1059  DNA internalization-related competence protein ComEC/Rec2  24.93 
 
 
839 aa  149  2.0000000000000003e-34  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_006368  lpp0680  hypothetical protein  23.88 
 
 
735 aa  149  2.0000000000000003e-34  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_007519  Dde_0547  ComEC/Rec2-related protein  28.66 
 
 
900 aa  149  2.0000000000000003e-34  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_007520  Tcr_0957  DNA internalization-related competence protein ComEC/Rec2  26.18 
 
 
841 aa  149  2.0000000000000003e-34  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_1368  DNA internalization-related competence protein ComEC/Rec2  26.37 
 
 
770 aa  149  2.0000000000000003e-34  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_008532  STER_1520  metallo-beta-lactamase superfamily hydrolase  26.01 
 
 
746 aa  149  2.0000000000000003e-34  Streptococcus thermophilus LMD-9  Bacteria  normal  n/a   
 
 
-
 
NC_007404  Tbd_1759  DNA internalization-related competence protein ComEC/Rec2  28.37 
 
 
778 aa  149  3e-34  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  normal 
 
 
-
 
NC_011992  Dtpsy_0933  DNA internalization-related competence protein ComEC/Rec2  26.53 
 
 
861 aa  148  3e-34  Acidovorax ebreus TPSY  Bacteria  normal  0.337545  n/a   
 
 
-
 
NC_006369  lpl0663  hypothetical protein  23.74 
 
 
735 aa  148  4.0000000000000006e-34  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_003295  RSc1120  putative transporter DNA uptake transmembrane protein  25.6 
 
 
847 aa  147  7.0000000000000006e-34  Ralstonia solanacearum GMI1000  Bacteria  normal  0.0978754  normal  0.511509 
 
 
-
 
NC_012791  Vapar_3404  DNA internalization-related competence protein ComEC/Rec2  26.3 
 
 
747 aa  146  1e-33  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_2476  DNA internalization-related competence protein ComEC/Rec2  26.12 
 
 
766 aa  146  1e-33  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_010513  Xfasm12_0386  DNA uptake protein  27.15 
 
 
825 aa  145  2e-33  Xylella fastidiosa M12  Bacteria  normal  n/a   
 
 
-
 
NC_010508  Bcenmc03_2129  DNA internalization-related competence protein ComEC/Rec2  26.89 
 
 
829 aa  146  2e-33  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.326593  normal  0.0900672 
 
 
-
 
NC_014230  CA2559_04815  competence protein  28.11 
 
 
679 aa  145  4e-33  Croceibacter atlanticus HTCC2559  Bacteria  normal  n/a   
 
 
-
 
NC_007347  Reut_A1079  ComEC/Rec2-related protein:DNA internalization-related competence protein ComEC/Rec2  27.09 
 
 
800 aa  144  5e-33  Ralstonia eutropha JMP134  Bacteria  normal  0.723493  n/a   
 
 
-
 
NC_009632  SaurJH1_1680  DNA internalization-related competence protein ComEC/Rec2  23.65 
 
 
726 aa  144  6e-33  Staphylococcus aureus subsp. aureus JH1  Bacteria  decreased coverage  0.00317004  n/a   
 
 
-
 
NC_009487  SaurJH9_1645  DNA internalization-related competence protein ComEC/Rec2  23.65 
 
 
726 aa  144  6e-33  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  0.550311  n/a   
 
 
-
 
NC_010551  BamMC406_2021  DNA internalization-related competence protein ComEC/Rec2  27.09 
 
 
833 aa  144  6e-33  Burkholderia ambifaria MC40-6  Bacteria  normal  normal  0.130557 
 
 
-
 
NC_008062  Bcen_5966  DNA internalization-related competence protein ComEC/Rec2  26.94 
 
 
829 aa  144  6e-33  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.814009  n/a   
 
 
-
 
NC_008542  Bcen2424_2111  DNA internalization-related competence protein ComEC/Rec2  26.94 
 
 
829 aa  144  6e-33  Burkholderia cenocepacia HI2424  Bacteria  normal  0.261797  n/a   
 
 
-
 
NC_007298  Daro_2832  ComEC/Rec2-related protein:DNA internalization-related competence protein ComEC/Rec2  26.53 
 
 
772 aa  144  7e-33  Dechloromonas aromatica RCB  Bacteria  normal  0.395271  normal 
 
 
-
 
NC_010682  Rpic_0963  DNA internalization-related competence protein ComEC/Rec2  24.64 
 
 
840 aa  144  7e-33  Ralstonia pickettii 12J  Bacteria  normal  0.116554  normal  0.0504124 
 
 
-
 
NC_011658  BCAH187_A2853  putative S-layer protein  32.42 
 
 
461 aa  144  9e-33  Bacillus cereus AH187  Bacteria  hitchhiker  0.000112389  n/a   
 
 
-
 
NC_009901  Spea_1769  DNA internalization-related competence protein ComEC/Rec2  26.46 
 
 
812 aa  143  9.999999999999999e-33  Shewanella pealeana ATCC 700345  Bacteria  normal  0.479237  n/a   
 
 
-
 
NC_013216  Dtox_2072  beta-lactamase domain protein  32.42 
 
 
294 aa  143  9.999999999999999e-33  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.438751  normal 
 
 
-
 
NC_007777  Francci3_1258  ComEC/Rec2-related protein  26.55 
 
 
872 aa  143  1.9999999999999998e-32  Frankia sp. CcI3  Bacteria  normal  normal  0.0672087 
 
 
-
 
NC_011773  BCAH820_2811  putative S-layer protein  32.7 
 
 
461 aa  142  1.9999999999999998e-32  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.000000374812 
 
 
-
 
NC_007510  Bcep18194_A5417  DNA internalization-related competence protein ComEC/Rec2  27.15 
 
 
830 aa  142  3e-32  Burkholderia sp. 383  Bacteria  normal  0.560238  normal 
 
 
-
 
NC_013159  Svir_12600  DNA internalization-related competence protein ComEC/Rec2  27.46 
 
 
837 aa  141  3.9999999999999997e-32  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_007651  BTH_I1890  DNA internalization-related competence protein ComEC/Rec2  25.28 
 
 
845 aa  141  3.9999999999999997e-32  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK2530  S-layer protein  32.7 
 
 
461 aa  141  4.999999999999999e-32  Bacillus cereus E33L  Bacteria  decreased coverage  0.0000347347  n/a   
 
 
-
 
NC_011899  Hore_14040  beta-lactamase domain protein  31.79 
 
 
406 aa  141  4.999999999999999e-32  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_013501  Rmar_0031  DNA internalization-related competence protein ComEC/Rec2  28.12 
 
 
797 aa  140  1e-31  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_008390  Bamb_2148  DNA internalization-related competence protein ComEC/Rec2  27.2 
 
 
829 aa  139  1e-31  Burkholderia ambifaria AMMD  Bacteria  normal  0.705314  n/a   
 
 
-
 
NC_005945  BAS2613  S-layer protein  32.32 
 
 
461 aa  139  2e-31  Bacillus anthracis str. Sterne  Bacteria  normal  0.170996  n/a   
 
 
-
 
NC_010577  XfasM23_0350  DNA internalization-related competence protein ComEC/Rec2  27.34 
 
 
822 aa  139  2e-31  Xylella fastidiosa M23  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_2803  S-layer protein  32.32 
 
 
461 aa  139  2e-31  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.0432636  n/a   
 
 
-
 
NC_009972  Haur_2771  beta-lactamase domain-containing protein  36.58 
 
 
367 aa  138  3.0000000000000003e-31  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_011832  Mpal_2459  beta-lactamase domain protein  33.72 
 
 
479 aa  138  3.0000000000000003e-31  Methanosphaerula palustris E1-9c  Archaea  normal  normal 
 
 
-
 
NC_009092  Shew_1637  DNA internalization-related competence protein ComEC/Rec2  24.61 
 
 
761 aa  137  5e-31  Shewanella loihica PV-4  Bacteria  normal  0.594703  normal 
 
 
-
 
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