18 homologs were found in PanDaTox collection
for query gene Gura_0898 on replicon NC_009483
Organism: Geobacter uraniireducens Rf4



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009483  Gura_0898  CopG/DNA-binding domain-containing protein  100 
 
 
74 aa  146  1.0000000000000001e-34  Geobacter uraniireducens Rf4  Bacteria  decreased coverage  0.000000000639023  n/a   
 
 
-
 
NC_008609  Ppro_0787  CopG/DNA-binding domain-containing protein  56.52 
 
 
101 aa  80.5  0.000000000000007  Pelobacter propionicus DSM 2379  Bacteria  hitchhiker  0.000109224  n/a   
 
 
-
 
NC_008607  Ppro_3659  CopG/DNA-binding domain-containing protein  53.42 
 
 
73 aa  75.5  0.0000000000002  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_0809  CopG domain protein DNA-binding domain protein  45.95 
 
 
74 aa  71.6  0.000000000003  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU1569  CopG family transcriptional regulator  54.79 
 
 
71 aa  70.9  0.000000000005  Geobacter sulfurreducens PCA  Bacteria  normal  0.684865  n/a   
 
 
-
 
NC_008609  Ppro_0797  hypothetical protein  63.27 
 
 
141 aa  67.8  0.00000000005  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_4175  CopG/DNA-binding domain-containing protein  59.18 
 
 
61 aa  63.2  0.000000001  Geobacter uraniireducens Rf4  Bacteria  normal  0.0217937  n/a   
 
 
-
 
NC_002939  GSU3364  hypothetical protein  58.82 
 
 
101 aa  62  0.000000003  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_3884  CopG domain protein DNA-binding domain protein  61.22 
 
 
59 aa  61.6  0.000000003  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_011146  Gbem_3801  CopG domain protein DNA-binding domain protein  57.41 
 
 
59 aa  61.6  0.000000003  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_0056  CopG-like DNA-binding protein  58.7 
 
 
63 aa  59.7  0.00000001  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_012918  GM21_1285  CopG domain protein DNA-binding domain protein  59.57 
 
 
91 aa  59.3  0.00000002  Geobacter sp. M21  Bacteria  n/a    hitchhiker  7.81302e-17 
 
 
-
 
NC_011146  Gbem_2937  CopG domain protein DNA-binding domain protein  59.09 
 
 
91 aa  58.5  0.00000003  Geobacter bemidjiensis Bem  Bacteria  decreased coverage  0.0000000307395  n/a   
 
 
-
 
NC_010814  Glov_0468  hypothetical protein  60.47 
 
 
60 aa  55.5  0.0000003  Geobacter lovleyi SZ  Bacteria  normal  0.243553  n/a   
 
 
-
 
NC_009483  Gura_1587  hypothetical protein  51.16 
 
 
71 aa  47.8  0.00005  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.0040985  n/a   
 
 
-
 
NC_009483  Gura_0157  hypothetical protein  50 
 
 
58 aa  44.3  0.0005  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_0531  hypothetical protein  44.44 
 
 
58 aa  43.9  0.0008  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_1042  CopG domain protein DNA-binding domain protein  45.24 
 
 
53 aa  41.2  0.005  Geobacter sp. M21  Bacteria  n/a    normal  0.118983 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>