49 homologs were found in PanDaTox collection
for query gene Gobs_4279 on replicon NC_013757
Organism: Geodermatophilus obscurus DSM 43160



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013757  Gobs_4279  PPOX class putative F420-dependent enzyme  100 
 
 
130 aa  254  2e-67  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.52352  n/a   
 
 
-
 
NC_009664  Krad_1422  pyridoxamine 5'-phosphate oxidase-related FMN-binding  68.22 
 
 
133 aa  165  2e-40  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.0834851  normal  0.710342 
 
 
-
 
NC_013595  Sros_5600  hypothetical protein  68.75 
 
 
142 aa  145  1.0000000000000001e-34  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0719975  normal  0.397912 
 
 
-
 
NC_007777  Francci3_1242  Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase  61.65 
 
 
404 aa  146  1.0000000000000001e-34  Frankia sp. CcI3  Bacteria  normal  normal  0.194401 
 
 
-
 
NC_008699  Noca_0878  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  62.4 
 
 
132 aa  143  9e-34  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_008726  Mvan_3436  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  62.31 
 
 
137 aa  142  1e-33  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.876254  normal 
 
 
-
 
NC_009565  TBFG_12110  hypothetical protein  62.6 
 
 
137 aa  140  5e-33  Mycobacterium tuberculosis F11  Bacteria  hitchhiker  0.00852245  normal 
 
 
-
 
NC_013521  Sked_22670  Pyridoxamine 5'-phosphate oxidase  60.83 
 
 
135 aa  140  7e-33  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.530316  normal  0.229215 
 
 
-
 
NC_013093  Amir_1777  pyridoxamine 5'-phosphate oxidase-related FMN- binding  63.33 
 
 
130 aa  139  1.9999999999999998e-32  Actinosynnema mirum DSM 43827  Bacteria  normal  0.364078  n/a   
 
 
-
 
NC_014158  Tpau_2176  PPOX class putative F420-dependent enzyme  61.29 
 
 
132 aa  137  4.999999999999999e-32  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.099201  n/a   
 
 
-
 
NC_013131  Caci_3343  pyridoxamine 5'-phosphate oxidase-related FMN- binding  61.02 
 
 
139 aa  135  2e-31  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.0628718  normal  0.731519 
 
 
-
 
NC_009338  Mflv_3099  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  63.56 
 
 
130 aa  134  3.0000000000000003e-31  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.067273  normal  0.208498 
 
 
-
 
NC_014165  Tbis_2503  pyridoxamine 5'-phosphate oxidase-related FMN- binding protein  64.04 
 
 
128 aa  133  6.0000000000000005e-31  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.25394 
 
 
-
 
NC_014210  Ndas_1795  putative F420-dependent enzyme  57.02 
 
 
128 aa  131  3e-30  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.0896007  normal  0.545256 
 
 
-
 
NC_013235  Namu_1449  pyridoxamine 5'-phosphate oxidase-related FMN- binding  57.46 
 
 
135 aa  131  3.9999999999999996e-30  Nakamurella multipartita DSM 44233  Bacteria  normal  normal  0.45335 
 
 
-
 
NC_008705  Mkms_2526  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  66.02 
 
 
141 aa  124  5e-28  Mycobacterium sp. KMS  Bacteria  normal  0.247468  normal  0.640115 
 
 
-
 
NC_013595  Sros_7957  pyridoxamine 5'-phosphate oxidase-related FMN- binding protein  54.47 
 
 
131 aa  118  3e-26  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013441  Gbro_2474  PPOX class putative F420-dependent enzyme  61.02 
 
 
140 aa  112  3e-24  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_013174  Jden_1087  pyridoxamine 5'-phosphate oxidase-related FMN- binding  65.71 
 
 
136 aa  107  6e-23  Jonesia denitrificans DSM 20603  Bacteria  normal  0.0652825  normal 
 
 
-
 
NC_008146  Mmcs_2481  pyridoxamine 5'-phosphate oxidase-related, FMN-binding protein  64.13 
 
 
115 aa  105  1e-22  Mycobacterium sp. MCS  Bacteria  normal  0.282681  n/a   
 
 
-
 
NC_009077  Mjls_2518  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  64.13 
 
 
115 aa  105  1e-22  Mycobacterium sp. JLS  Bacteria  normal  0.136423  normal  0.885746 
 
 
-
 
NC_013131  Caci_6470  pyridoxamine 5'-phosphate oxidase-related FMN- binding  53.04 
 
 
128 aa  101  3e-21  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.941513  normal 
 
 
-
 
NC_013530  Xcel_1298  pyridoxamine 5'-phosphate oxidase-related FMN- binding protein  56.56 
 
 
134 aa  94.7  4e-19  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_2275  pyridoxamine 5'-phosphate oxidase-related FMN-binding  78.33 
 
 
196 aa  94  7e-19  Frankia sp. EAN1pec  Bacteria  normal  0.187193  normal  0.0620251 
 
 
-
 
NC_013093  Amir_4233  pyridoxamine 5'-phosphate oxidase-related FMN- binding  34.62 
 
 
143 aa  52.8  0.000002  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_1607  putative F420-dependent enzyme  31.54 
 
 
143 aa  48.9  0.00002  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.105507  normal  0.590252 
 
 
-
 
NC_013441  Gbro_2705  PPOX class putative F420-dependent enzyme  31.01 
 
 
143 aa  47.8  0.00005  Gordonia bronchialis DSM 43247  Bacteria  normal  0.032805  n/a   
 
 
-
 
NC_013757  Gobs_0488  PPOX class putative F420-dependent enzyme  35.06 
 
 
144 aa  47.4  0.00006  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.620504  n/a   
 
 
-
 
NC_013510  Tcur_1991  pyridoxamine 5'-phosphate oxidase-related FMN- binding protein  31.85 
 
 
143 aa  47.4  0.00006  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.00000065495  n/a   
 
 
-
 
NC_014151  Cfla_2114  putative F420-dependent enzyme  36.52 
 
 
133 aa  46.6  0.0001  Cellulomonas flavigena DSM 20109  Bacteria  normal  normal 
 
 
-
 
NC_008578  Acel_1969  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  31.39 
 
 
152 aa  46.2  0.0001  Acidothermus cellulolyticus 11B  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_13160  Pyridoxamine 5'-phosphate oxidase  40.22 
 
 
153 aa  45.8  0.0002  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.0760402  normal  0.982249 
 
 
-
 
NC_014151  Cfla_3070  putative F420-dependent enzyme  42.42 
 
 
160 aa  45.1  0.0003  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.446524  decreased coverage  0.000000025424 
 
 
-
 
NC_013093  Amir_7022  pyridoxamine 5'-phosphate oxidase-related FMN- binding  35.85 
 
 
143 aa  44.3  0.0005  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_3876  pyridoxamine 5'-phosphate oxidase-related FMN-binding  27.86 
 
 
143 aa  43.1  0.001  Frankia sp. EAN1pec  Bacteria  normal  normal  0.0335878 
 
 
-
 
NC_014210  Ndas_1357  putative F420-dependent enzyme  41.76 
 
 
153 aa  43.5  0.001  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.211634  normal 
 
 
-
 
NC_013124  Afer_0584  pyridoxamine 5'-phosphate oxidase-related FMN- binding  40.24 
 
 
141 aa  42.7  0.002  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  0.413113  n/a   
 
 
-
 
NC_009664  Krad_1804  pyridoxamine 5'-phosphate oxidase-related FMN-binding  36.17 
 
 
155 aa  42.7  0.002  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.63261  normal  0.464449 
 
 
-
 
NC_008726  Mvan_4567  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  35.29 
 
 
147 aa  42.4  0.002  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.413715 
 
 
-
 
NC_013739  Cwoe_2340  PPOX class putative F420-dependent enzyme  34.65 
 
 
143 aa  42  0.003  Conexibacter woesei DSM 14684  Bacteria  normal  0.776273  normal  0.0697845 
 
 
-
 
NC_012669  Bcav_3863  pyridoxamine 5'-phosphate oxidase-related protein FMN-binding  40.23 
 
 
154 aa  41.6  0.003  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.673167  normal  0.145869 
 
 
-
 
NC_013922  Nmag_1201  pyridoxamine 5'-phosphate oxidase-related FMN-binding protein  34.74 
 
 
130 aa  42  0.003  Natrialba magadii ATCC 43099  Archaea  normal  n/a   
 
 
-
 
NC_009972  Haur_1688  pyridoxamine 5'-phosphate oxidase-related FMN-binding  28.43 
 
 
165 aa  41.6  0.004  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.317072  n/a   
 
 
-
 
NC_008699  Noca_4058  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  33.59 
 
 
184 aa  41.2  0.004  Nocardioides sp. JS614  Bacteria  normal  0.321297  n/a   
 
 
-
 
NC_008148  Rxyl_0524  pyridoxamine 5'-phosphate oxidase-related, FMN-binding protein  34.38 
 
 
134 aa  41.6  0.004  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.207279  n/a   
 
 
-
 
NC_009664  Krad_0082  pyridoxamine 5'-phosphate oxidase-related FMN-binding  33 
 
 
143 aa  41.2  0.005  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.747237  normal  0.05521 
 
 
-
 
NC_009338  Mflv_2137  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  35.56 
 
 
147 aa  41.2  0.005  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal  0.332773 
 
 
-
 
NC_008531  LEUM_0920  pyridoxine 5'-phosphate oxidase V related favin-nucleotide-binding protein  34.51 
 
 
132 aa  40.8  0.006  Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293  Bacteria  hitchhiker  0.00810829  n/a   
 
 
-
 
NC_014248  Aazo_1306  pyridoxamine 5'-phosphate oxidase-like FMN-binding protein  24.41 
 
 
153 aa  40  0.009  'Nostoc azollae' 0708  Bacteria  normal  n/a   
 
 
-
 
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