8 homologs were found in PanDaTox collection
for query gene Gobs_3977 on replicon NC_013757
Organism: Geodermatophilus obscurus DSM 43160



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013757  Gobs_3977  LPXTG-motif cell wall anchor domain protein  100 
 
 
314 aa  608  1e-173  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.330981  n/a   
 
 
-
 
NC_013521  Sked_03680  hypothetical protein  41.89 
 
 
726 aa  52  0.00001  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_03690  hypothetical protein  40.54 
 
 
729 aa  48.1  0.0002  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.635781  normal  0.651535 
 
 
-
 
NC_014151  Cfla_0540  LPXTG-motif cell wall anchor domain protein  30.28 
 
 
340 aa  48.1  0.0002  Cellulomonas flavigena DSM 20109  Bacteria  normal  hitchhiker  0.00025616 
 
 
-
 
NC_013521  Sked_09720  hypothetical protein  53.85 
 
 
704 aa  45.8  0.0009  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.506636  normal 
 
 
-
 
NC_012669  Bcav_3684  LPXTG-motif cell wall anchor domain protein  34.04 
 
 
774 aa  44.7  0.002  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.585223 
 
 
-
 
NC_012669  Bcav_2782  Ig domain protein group 1 domain protein  46.15 
 
 
4672 aa  43.5  0.004  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.117201 
 
 
-
 
NC_013235  Namu_4400  hypothetical protein  36.57 
 
 
561 aa  42.7  0.007  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
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