24 homologs were found in PanDaTox collection
for query gene Gbro_4374 on replicon NC_013441
Organism: Gordonia bronchialis DSM 43247



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013441  Gbro_4374  regulatory protein TetR  100 
 
 		 184 aa  357  4e-98  Gordonia bronchialis DSM 43247  Bacteria  normal  0.985055  n/a   
 
 
-
 
NC_008699  Noca_3508  regulatory protein, TetR  32.93 
 
 		 200 aa  68.9  0.00000000003  Nocardioides sp. JS614  Bacteria  normal  0.0988004  n/a   
 
 
-
 
NC_008700  Sama_3267  TetR family transcriptional regulator  39.39 
 
 		 188 aa  52  0.000005  Shewanella amazonensis SB2B  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013456  VEA_001979  transcriptional regulator TetR family  34.29 
 
 		 193 aa  49.3  0.00003  Vibrio sp. Ex25  Bacteria  normal  0.507988  n/a   
 
 
-
 
NC_007337  Reut_D6485  regulatory protein, TetR  35.11 
 
 		 278 aa  47  0.0002  Ralstonia eutropha JMP134  Bacteria  normal  0.521213  n/a   
 
 
-
 
NC_011312  VSAL_I0091  HTH-type transcriptional regulator, TetR family  33.33 
 
 		 199 aa  46.6  0.0002  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.903201  n/a   
 
 
-
 
NC_008528  OEOE_0179  TetR family transcriptional regulator  38.24 
 
 		 193 aa  45.1  0.0007  Oenococcus oeni PSU-1  Bacteria  normal  0.0807108  n/a   
 
 
-
 
NC_011126  HY04AAS1_0353  transcriptional regulator, TetR family  30.14 
 
 		 191 aa  45.1  0.0007  Hydrogenobaculum sp. Y04AAS1  Bacteria  hitchhiker  0.000439096  n/a   
 
 
-
 
NC_008609  Ppro_0332  TetR family transcriptional regulator  33.82 
 
 		 192 aa  44.3  0.0009  Pelobacter propionicus DSM 2379  Bacteria  hitchhiker  0.00337125  n/a   
 
 
-
 
NC_008700  Sama_2856  TetR family transcriptional regulator  35.94 
 
 		 194 aa  44.3  0.001  Shewanella amazonensis SB2B  Bacteria  normal  0.661308  normal  1 
 
 
-
 
NC_012912  Dd1591_1459  transcriptional regulator, TetR family  39.13 
 
 		 187 aa  44.3  0.001  Dickeya zeae Ech1591  Bacteria  normal  1  n/a   
 
 
-
 
NC_010814  Glov_3436  transcriptional regulator, TetR family  31.43 
 
 		 194 aa  43.1  0.002  Geobacter lovleyi SZ  Bacteria  normal  0.262135  n/a   
 
 
-
 
NC_012034  Athe_1516  transcriptional regulator, TetR family  31.75 
 
 		 203 aa  43.1  0.002  Anaerocellum thermophilum DSM 6725  Bacteria  normal  1  n/a   
 
 
-
 
NC_010338  Caul_4024  TetR family transcriptional regulator  28.57 
 
 		 199 aa  43.5  0.002  Caulobacter sp. K31  Bacteria  normal  0.497962  normal  0.530155 
 
 
-
 
NC_007413  Ava_2548  TetR family transcriptional regulator  24.04 
 
 		 236 aa  42.7  0.003  Anabaena variabilis ATCC 29413  Bacteria  decreased coverage  0.00000000944763  normal  1 
 
 
-
 
NC_011080  SNSL254_A0633  TetR family transcriptional regulator  36.67 
 
 		 193 aa  42.4  0.004  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  1  normal  1 
 
 
-
 
NC_002939  GSU2698  TetR family transcriptional regulator  31.34 
 
 		 203 aa  42  0.004  Geobacter sulfurreducens PCA  Bacteria  normal  1  n/a   
 
 
-
 
NC_011205  SeD_A0676  TetR family transcriptional regulator  36.67 
 
 		 193 aa  42.4  0.004  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.0323458  normal  1 
 
 
-
 
NC_009943  Dole_0184  TetR family transcriptional regulator  26.39 
 
 		 335 aa  42  0.006  Desulfococcus oleovorans Hxd3  Bacteria  unclonable  0.000000000505732  n/a   
 
 
-
 
NC_011083  SeHA_C0692  TetR family transcriptional regulator  36.67 
 
 		 193 aa  41.6  0.007  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  0.253039  normal  1 
 
 
-
 
NC_011149  SeAg_B0619  transcriptional regulator, TetR family  36.67 
 
 		 193 aa  41.6  0.007  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  1  n/a   
 
 
-
 
NC_008726  Mvan_1059  TetR family transcriptional regulator  28.93 
 
 		 217 aa  41.6  0.007  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007796  Mhun_1236  TetR family transcriptional regulator  34.62 
 
 		 196 aa  41.2  0.007  Methanospirillum hungatei JF-1  Archaea  normal  1  normal  0.0369519 
 
 
-
 
NC_013530  Xcel_2444  regulatory protein TetR  40.22 
 
 		 195 aa  40.8  0.01  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.0957068  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>