10 homologs were found in PanDaTox collection
for query gene Gbem_2675 on replicon NC_011146
Organism: Geobacter bemidjiensis Bem



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011146  Gbem_2675  hypothetical protein  100 
 
 
242 aa  494  1e-139  Geobacter bemidjiensis Bem  Bacteria  normal  0.912699  n/a   
 
 
-
 
NC_011894  Mnod_2227  hypothetical protein  48.31 
 
 
249 aa  213  1.9999999999999998e-54  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_007948  Bpro_2501  hypothetical protein  36.09 
 
 
189 aa  93.6  3e-18  Polaromonas sp. JS666  Bacteria  normal  normal  0.101895 
 
 
-
 
NC_011146  Gbem_3987  hypothetical protein  40.44 
 
 
221 aa  93.6  3e-18  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_008751  Dvul_0567  pyruvate, water dikinase  28.43 
 
 
1062 aa  92  7e-18  Desulfovibrio vulgaris DP4  Bacteria  normal  0.266468  normal  0.689283 
 
 
-
 
NC_010581  Bind_2522  hypothetical protein  36.92 
 
 
189 aa  84.3  0.000000000000002  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal  0.681731 
 
 
-
 
NC_010725  Mpop_1892  hypothetical protein  29.85 
 
 
214 aa  68.2  0.0000000001  Methylobacterium populi BJ001  Bacteria  normal  normal  0.957451 
 
 
-
 
NC_011757  Mchl_4737  hypothetical protein  29.1 
 
 
214 aa  66.6  0.0000000003  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.514371  normal 
 
 
-
 
NC_013173  Dbac_1886  pyruvate phosphate dikinase PEP/pyruvate- binding  25.79 
 
 
1037 aa  63.5  0.000000003  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_013501  Rmar_1742  protein of unknown function DUF1080  45 
 
 
241 aa  42  0.01  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
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