14 homologs were found in PanDaTox collection
for query gene Gbem_2007 on replicon NC_011146
Organism: Geobacter bemidjiensis Bem



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_011146  Gbem_2007  hypothetical protein  100 
 
 		 59 aa  122  1e-27  Geobacter bemidjiensis Bem  Bacteria  normal  0.572608  n/a   
 
 
-
 
NC_012918  GM21_2215  hypothetical protein  93.22 
 
 		 59 aa  117  7.999999999999999e-26  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.00000000000652261 
 
 
-
 
NC_002939  GSU2778  hypothetical protein  77.59 
 
 		 61 aa  96.3  1e-19  Geobacter sulfurreducens PCA  Bacteria  normal  1  n/a   
 
 
-
 
NC_010814  Glov_0140  hypothetical protein  75.44 
 
 		 61 aa  92  3e-18  Geobacter lovleyi SZ  Bacteria  normal  1  n/a   
 
 
-
 
NC_011146  Gbem_0100  hypothetical protein  72.41 
 
 		 71 aa  89.4  1e-17  Geobacter bemidjiensis Bem  Bacteria  hitchhiker  0.00000965946  n/a   
 
 
-
 
NC_012918  GM21_0082  hypothetical protein  72.41 
 
 		 71 aa  89.4  2e-17  Geobacter sp. M21  Bacteria  n/a    hitchhiker  1.88298e-20 
 
 
-
 
NC_009831  Ssed_2794  MerR family transcriptional regulator  48.21 
 
 		 181 aa  54.7  0.0000004  Shewanella sediminis HAW-EB3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010814  Glov_0139  transcriptional regulator, MerR family  37.29 
 
 		 183 aa  54.7  0.0000004  Geobacter lovleyi SZ  Bacteria  normal  1  n/a   
 
 
-
 
NC_011146  Gbem_2008  transcriptional regulator, MerR family  44.64 
 
 		 191 aa  51.2  0.000005  Geobacter bemidjiensis Bem  Bacteria  normal  1  n/a   
 
 
-
 
NC_012918  GM21_2214  transcriptional regulator, MerR family  44.44 
 
 		 177 aa  50.4  0.000007  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.0000000000011193 
 
 
-
 
NC_008009  Acid345_0264  MerR family transcriptional regulator  36.84 
 
 		 173 aa  50.4  0.000008  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.829201  normal  1 
 
 
-
 
NC_008609  Ppro_1393  hypothetical protein  61.76 
 
 		 38 aa  49.7  0.00001  Pelobacter propionicus DSM 2379  Bacteria  normal  1  n/a   
 
 
-
 
NC_002939  GSU2779  MerR family transcriptional regulator  41.07 
 
 		 185 aa  47.4  0.00007  Geobacter sulfurreducens PCA  Bacteria  normal  0.0575166  n/a   
 
 
-
 
NC_010571  Oter_3014  MerR family transcriptional regulator  36.54 
 
 		 195 aa  42.4  0.002  Opitutus terrae PB90-1  Bacteria  normal  0.20917  normal  0.37376 
 
 
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