11 homologs were found in PanDaTox collection
for query gene Gbem_1061 on replicon NC_011146
Organism: Geobacter bemidjiensis Bem



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011146  Gbem_1061  TadE family protein  100 
 
 
166 aa  335  1.9999999999999998e-91  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_3200  TadE family protein  87.35 
 
 
166 aa  295  2e-79  Geobacter sp. M21  Bacteria  n/a    normal  0.798849 
 
 
-
 
NC_010676  Bphyt_4622  TadE family protein  35.19 
 
 
209 aa  67.8  0.00000000006  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.482057 
 
 
-
 
NC_013525  Tter_1023  TadE family protein  38.57 
 
 
135 aa  51.2  0.000006  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_008609  Ppro_2705  TadE family protein  28.07 
 
 
154 aa  45.1  0.0005  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_2112  TadE family protein  35.19 
 
 
137 aa  44.3  0.0008  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_010505  Mrad2831_0363  TadE family protein  32.65 
 
 
204 aa  43.9  0.001  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.0984361  normal 
 
 
-
 
NC_012791  Vapar_1526  TadE family protein  32.81 
 
 
149 aa  43.9  0.001  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_013223  Dret_1165  TadE family protein  36.99 
 
 
143 aa  43.5  0.001  Desulfohalobium retbaense DSM 5692  Bacteria  normal  0.0463265  normal 
 
 
-
 
NC_011365  Gdia_3495  hypothetical protein  27.11 
 
 
192 aa  42  0.004  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  0.520499  normal  0.051505 
 
 
-
 
NC_007512  Plut_0658  hypothetical protein  39.13 
 
 
140 aa  41.6  0.005  Chlorobium luteolum DSM 273  Bacteria  normal  normal  0.0921771 
 
 
-
 
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