22 homologs were found in PanDaTox collection
for query gene GYMC61_0438 on replicon NC_013411
Organism: Geobacillus sp. Y412MC61



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013411  GYMC61_0438  Peptidoglycan-binding lysin domain protein  100 
 
 
180 aa  363  1e-100  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_012793  GWCH70_2191  Peptidoglycan-binding LysM  38.78 
 
 
191 aa  90.5  1e-17  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK1368  peptidoglycan-binding protein  29.19 
 
 
159 aa  63.2  0.000000002  Bacillus cereus E33L  Bacteria  hitchhiker  0.000000000189168  n/a   
 
 
-
 
NC_003909  BCE_1612  lysM domain-containing protein  27.95 
 
 
159 aa  59.3  0.00000003  Bacillus cereus ATCC 10987  Bacteria  decreased coverage  0.0000000378837  n/a   
 
 
-
 
NC_011772  BCG9842_B3803  lysM domain protein  28.57 
 
 
159 aa  58.9  0.00000003  Bacillus cereus G9842  Bacteria  unclonable  0.000000000302093  hitchhiker  1.81276e-16 
 
 
-
 
NC_011725  BCB4264_A1542  lysM domain protein  28.57 
 
 
159 aa  59.3  0.00000003  Bacillus cereus B4264  Bacteria  hitchhiker  0.001251  n/a   
 
 
-
 
NC_011658  BCAH187_A1648  lysM domain protein  27.95 
 
 
159 aa  59.3  0.00000003  Bacillus cereus AH187  Bacteria  unclonable  0.000000000383151  n/a   
 
 
-
 
NC_010184  BcerKBAB4_1409  peptidoglycan-binding LysM  29.01 
 
 
159 aa  58.9  0.00000004  Bacillus weihenstephanensis KBAB4  Bacteria  unclonable  0.0000000791474  n/a   
 
 
-
 
NC_007530  GBAA_1507  lysm domain-containing protein  27.95 
 
 
159 aa  55.1  0.0000005  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  unclonable  0.00000000000123436  n/a   
 
 
-
 
NC_005945  BAS1396  lysM domain-containing protein  27.95 
 
 
159 aa  55.1  0.0000005  Bacillus anthracis str. Sterne  Bacteria  hitchhiker  0.0000873032  n/a   
 
 
-
 
NC_005957  BT9727_1369  peptidoglycan-binding protein  28.57 
 
 
162 aa  53.5  0.000001  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  hitchhiker  5.6403400000000004e-18  n/a   
 
 
-
 
NC_011773  BCAH820_1581  lysM domain protein  28.57 
 
 
159 aa  53.5  0.000002  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  2.05729e-36 
 
 
-
 
NC_002976  SERP1048  elastin binding protein, putative  48.98 
 
 
460 aa  50.8  0.000009  Staphylococcus epidermidis RP62A  Bacteria  normal  n/a   
 
 
-
 
NC_009487  SaurJH9_1537  peptidoglycan-binding LysM  41.67 
 
 
486 aa  45.4  0.0004  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  n/a   
 
 
-
 
NC_009632  SaurJH1_1568  peptidoglycan-binding LysM  41.67 
 
 
486 aa  45.4  0.0004  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  n/a   
 
 
-
 
NC_009674  Bcer98_1210  peptidoglycan-binding LysM  26.67 
 
 
160 aa  43.9  0.001  Bacillus cytotoxicus NVH 391-98  Bacteria  unclonable  0.0000000146268  n/a   
 
 
-
 
NC_013946  Mrub_3022  NLP/P60 protein  40.62 
 
 
289 aa  43.5  0.002  Meiothermus ruber DSM 1279  Bacteria  normal  0.618403  normal  0.062405 
 
 
-
 
NC_007947  Mfla_0431  peptidoglycan-binding LysM  41.51 
 
 
543 aa  42.4  0.004  Methylobacillus flagellatus KT  Bacteria  hitchhiker  0.000410197  normal  0.723763 
 
 
-
 
NC_011898  Ccel_1338  protein serine/threonine phosphatase  40.35 
 
 
474 aa  42  0.005  Clostridium cellulolyticum H10  Bacteria  hitchhiker  0.000169814  n/a   
 
 
-
 
NC_013061  Phep_2915  Peptidoglycan-binding LysM  41.07 
 
 
393 aa  41.2  0.008  Pedobacter heparinus DSM 2366  Bacteria  normal  0.992614  hitchhiker  0.000000148718 
 
 
-
 
NC_008390  Bamb_1317  peptidoglycan-binding LysM  37.74 
 
 
453 aa  40.8  0.009  Burkholderia ambifaria AMMD  Bacteria  normal  n/a   
 
 
-
 
NC_010551  BamMC406_1356  peptidoglycan-binding LysM  37.74 
 
 
453 aa  40.8  0.01  Burkholderia ambifaria MC40-6  Bacteria  normal  0.53849  normal 
 
 
-
 
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