10 homologs were found in PanDaTox collection
for query gene GSU2592 on replicon NC_002939
Organism: Geobacter sulfurreducens PCA



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_002939  GSU2592  hypothetical protein  100 
 
 
436 aa  902    Geobacter sulfurreducens PCA  Bacteria  normal  0.788234  n/a   
 
 
-
 
NC_008346  Swol_2269  hypothetical protein  39 
 
 
541 aa  78.2  0.0000000000003  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  0.0213435  n/a   
 
 
-
 
NC_011205  SeD_A2310  TIR protein  51.52 
 
 
293 aa  77  0.0000000000006  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  hitchhiker  0.00000000000002638 
 
 
-
 
NC_008686  Pden_0113  TIR protein  40 
 
 
299 aa  75.1  0.000000000002  Paracoccus denitrificans PD1222  Bacteria  normal  0.0221539  hitchhiker  0.00922586 
 
 
-
 
NC_009505  BOV_0263  hypothetical protein  45.35 
 
 
275 aa  73.9  0.000000000005  Brucella ovis ATCC 25840  Bacteria  normal  0.425608  n/a   
 
 
-
 
NC_008740  Maqu_1263  TIR protein  46.27 
 
 
255 aa  63.5  0.000000007  Marinobacter aquaeolei VT8  Bacteria  normal  0.0901664  n/a   
 
 
-
 
NC_009717  Xaut_4885  hypothetical protein  40.79 
 
 
205 aa  62.8  0.00000001  Xanthobacter autotrophicus Py2  Bacteria  normal  normal  0.935392 
 
 
-
 
NC_008146  Mmcs_1472  Toll-interleukin receptor  35.23 
 
 
283 aa  62.4  0.00000002  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_1496  TIR protein  35.23 
 
 
283 aa  62.4  0.00000002  Mycobacterium sp. KMS  Bacteria  normal  0.539335  normal 
 
 
-
 
NC_009720  Xaut_2265  hypothetical protein  41.33 
 
 
101 aa  60.8  0.00000004  Xanthobacter autotrophicus Py2  Bacteria  normal  0.310683  normal  0.0284056 
 
 
-
 
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