170 homologs were found in PanDaTox collection
for query gene GM21_2295 on replicon NC_012918
Organism: Geobacter sp. M21



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_012918  GM21_2295  3-demethylubiquinone-9 3-methyltransferase  100 
 
 
162 aa  338  2e-92  Geobacter sp. M21  Bacteria  n/a    normal  0.0311325 
 
 
-
 
NC_011146  Gbem_1925  3-demethylubiquinone-9 3-methyltransferase  96.3 
 
 
162 aa  330  4e-90  Geobacter bemidjiensis Bem  Bacteria  hitchhiker  0.00859157  n/a   
 
 
-
 
NC_009483  Gura_0848  3-demethylubiquinone-9 3-methyltransferase  91.14 
 
 
161 aa  304  3e-82  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.000000136676  n/a   
 
 
-
 
NC_010814  Glov_1008  3-demethylubiquinone-9 3-methyltransferase  88.61 
 
 
161 aa  298  3e-80  Geobacter lovleyi SZ  Bacteria  normal  0.214378  n/a   
 
 
-
 
NC_002939  GSU2437  hypothetical protein  87.5 
 
 
161 aa  296  6e-80  Geobacter sulfurreducens PCA  Bacteria  hitchhiker  0.00410034  n/a   
 
 
-
 
NC_007517  Gmet_2483  3-demethylubiquinone-9 3-methyltransferase  89.24 
 
 
161 aa  295  2e-79  Geobacter metallireducens GS-15  Bacteria  hitchhiker  0.0000913491  normal 
 
 
-
 
NC_011992  Dtpsy_1607  3-demethylubiquinone-9 3-methyltransferase  81.65 
 
 
161 aa  281  2.0000000000000002e-75  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_010803  Clim_0594  3-demethylubiquinone-9 3-methyltransferase  82.28 
 
 
161 aa  278  3e-74  Chlorobium limicola DSM 245  Bacteria  normal  0.382309  n/a   
 
 
-
 
NC_012792  Vapar_5736  3-demethylubiquinone-9 3-methyltransferase  81.17 
 
 
159 aa  265  2e-70  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_008825  Mpe_A1462  hypothetical protein  78.71 
 
 
159 aa  261  3e-69  Methylibium petroleiphilum PM1  Bacteria  hitchhiker  0.00432951  normal  0.76996 
 
 
-
 
NC_007348  Reut_B4637  3-demethylubiquinone-9 3-methyltransferase  79.22 
 
 
159 aa  257  5.0000000000000005e-68  Ralstonia eutropha JMP134  Bacteria  normal  0.874058  n/a   
 
 
-
 
NC_007948  Bpro_1399  3-demethylubiquinone-9 3-methyltransferase  76.62 
 
 
165 aa  257  5.0000000000000005e-68  Polaromonas sp. JS666  Bacteria  normal  normal  0.3347 
 
 
-
 
NC_012857  Rpic12D_3981  3-demethylubiquinone-9 3-methyltransferase  77.92 
 
 
159 aa  255  2e-67  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_010678  Rpic_3867  3-demethylubiquinone-9 3-methyltransferase  77.92 
 
 
159 aa  255  2e-67  Ralstonia pickettii 12J  Bacteria  normal  normal  0.44427 
 
 
-
 
NC_007614  Nmul_A2171  3-demethylubiquinone-9 3-methyltransferase  79.11 
 
 
178 aa  253  6e-67  Nitrosospira multiformis ATCC 25196  Bacteria  normal  n/a   
 
 
-
 
NC_010322  PputGB1_2287  3-demethylubiquinone-9 3-methyltransferase  75.64 
 
 
159 aa  253  9e-67  Pseudomonas putida GB-1  Bacteria  normal  0.719915  normal  0.308943 
 
 
-
 
NC_007974  Rmet_3848  putative 3-demethylubiquinone-9 3-methyltransferase  77.27 
 
 
161 aa  251  2.0000000000000002e-66  Cupriavidus metallidurans CH34  Bacteria  normal  normal  0.52304 
 
 
-
 
NC_003296  RS03882  hypothetical protein  77.78 
 
 
165 aa  251  4.0000000000000004e-66  Ralstonia solanacearum GMI1000  Bacteria  normal  0.279037  normal  0.767846 
 
 
-
 
NC_002947  PP_3629  3-demethylubiquinone-9 3-methyltransferase  75.64 
 
 
159 aa  249  8.000000000000001e-66  Pseudomonas putida KT2440  Bacteria  normal  0.481282  normal 
 
 
-
 
NC_008781  Pnap_4028  3-demethylubiquinone-9 3-methyltransferase  74.68 
 
 
176 aa  249  2e-65  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal  0.636645 
 
 
-
 
NC_008686  Pden_0500  3-demethylubiquinone-9 3-methyltransferase  76.62 
 
 
159 aa  247  6e-65  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_007964  Nham_0783  3-demethylubiquinone-9 3-methyltransferase  77.12 
 
 
166 aa  246  7e-65  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_009512  Pput_2104  3-demethylubiquinone-9 3-methyltransferase  73.08 
 
 
159 aa  242  1.9999999999999999e-63  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_2371  3-demethylubiquinone-9 3-methyltransferase  72.44 
 
 
169 aa  241  3e-63  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_010571  Oter_2255  3-demethylubiquinone-9 3-methyltransferase  75.16 
 
 
173 aa  239  1e-62  Opitutus terrae PB90-1  Bacteria  normal  0.604126  normal  0.0160885 
 
 
-
 
NC_008009  Acid345_1669  3-demethylubiquinone-9 3-methyltransferase  73.38 
 
 
158 aa  238  2.9999999999999997e-62  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_008254  Meso_1468  3-demethylubiquinone-9 3-methyltransferase  73.38 
 
 
179 aa  236  9e-62  Chelativorans sp. BNC1  Bacteria  normal  0.852155  n/a   
 
 
-
 
NC_011891  A2cp1_3393  3-demethylubiquinone-9 3-methyltransferase  71.24 
 
 
157 aa  236  9e-62  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_008048  Sala_0011  3-demethylubiquinone-9 3-methyltransferase  71.25 
 
 
167 aa  235  2e-61  Sphingopyxis alaskensis RB2256  Bacteria  normal  0.448662  normal  0.0489572 
 
 
-
 
NC_008463  PA14_28960  hypothetical protein  73.08 
 
 
159 aa  235  2e-61  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.295823  hitchhiker  0.0000347275 
 
 
-
 
NC_009675  Anae109_3253  3-demethylubiquinone-9 3-methyltransferase  73.38 
 
 
157 aa  234  3e-61  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal 
 
 
-
 
NC_011145  AnaeK_3319  3-demethylubiquinone-9 3-methyltransferase  70.59 
 
 
157 aa  234  4e-61  Anaeromyxobacter sp. K  Bacteria  normal  0.850052  n/a   
 
 
-
 
NC_011892  Mnod_8264  3-demethylubiquinone-9 3-methyltransferase  74.03 
 
 
158 aa  233  7e-61  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.677958  n/a   
 
 
-
 
NC_009485  BBta_2181  hypothetical protein  73.2 
 
 
159 aa  233  9e-61  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_011892  Mnod_8415  3-demethylubiquinone-9 3-methyltransferase  73.38 
 
 
158 aa  233  1.0000000000000001e-60  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_012852  Rleg_6022  3-demethylubiquinone-9 3-methyltransferase  69.23 
 
 
157 aa  231  3e-60  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_4000  hypothetical protein  71.79 
 
 
159 aa  231  3e-60  Pseudomonas aeruginosa PA7  Bacteria  normal  0.656805  n/a   
 
 
-
 
NC_009620  Smed_4431  3-demethylubiquinone-9 3-methyltransferase  67.72 
 
 
161 aa  231  4.0000000000000004e-60  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_007406  Nwi_0688  3-demethylubiquinone-9 3-methyltransferase  77.92 
 
 
159 aa  230  5e-60  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.331587  normal 
 
 
-
 
NC_007760  Adeh_3194  3-demethylubiquinone-9 3-methyltransferase  70.78 
 
 
157 aa  230  7.000000000000001e-60  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_3648  3-demethylubiquinone-9 3-methyltransferase  71.43 
 
 
158 aa  227  5e-59  Methylobacterium sp. 4-46  Bacteria  normal  hitchhiker  0.00571731 
 
 
-
 
NC_011071  Smal_2877  3-demethylubiquinone-9 3-methyltransferase  68.18 
 
 
164 aa  226  7e-59  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal 
 
 
-
 
NC_012850  Rleg_2549  3-demethylubiquinone-9 3-methyltransferase  75.32 
 
 
157 aa  225  2e-58  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_010524  Lcho_2956  3-demethylubiquinone-9 3-methyltransferase  66.88 
 
 
159 aa  223  6e-58  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_007794  Saro_2888  3-demethylubiquinone-9 3-methyltransferase  67.09 
 
 
165 aa  222  2e-57  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.577012  n/a   
 
 
-
 
NC_011369  Rleg2_2242  3-demethylubiquinone-9 3-methyltransferase  74.03 
 
 
157 aa  220  7e-57  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_009429  Rsph17025_3630  hypothetical protein  65.36 
 
 
165 aa  218  1.9999999999999999e-56  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.0256913  normal 
 
 
-
 
NC_011892  Mnod_8684  3-demethylubiquinone-9 3-methyltransferase  77.05 
 
 
143 aa  208  3e-53  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_2267  3-demethylubiquinone-9 3-methyltransferase  78.81 
 
 
150 aa  202  1e-51  Acidovorax sp. JS42  Bacteria  normal  0.0386327  normal  0.842376 
 
 
-
 
NC_010510  Mrad2831_6218  3-demethylubiquinone-9 3-methyltransferase  61.54 
 
 
166 aa  201  3e-51  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.701967  normal  0.334092 
 
 
-
 
NC_011666  Msil_2215  3-demethylubiquinone-9 3-methyltransferase  61.94 
 
 
159 aa  195  2.0000000000000003e-49  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_010581  Bind_3228  3-demethylubiquinone-9 3-methyltransferase  55.7 
 
 
173 aa  173  9.999999999999999e-43  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal 
 
 
-
 
NC_009050  Rsph17029_3841  3-demethylubiquinone-9 3-methyltransferase  52.41 
 
 
158 aa  161  3e-39  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.0119527  normal 
 
 
-
 
NC_007494  RSP_3112  hypothetical protein  52.41 
 
 
158 aa  160  5.0000000000000005e-39  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.0318978  n/a   
 
 
-
 
NC_011761  AFE_0502  hypothetical protein  77.89 
 
 
141 aa  158  3e-38  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  n/a   
 
 
-
 
NC_011206  Lferr_0663  3-demethylubiquinone-9 3-methyltransferase  77.89 
 
 
141 aa  158  3e-38  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  normal 
 
 
-
 
NC_013440  Hoch_4782  3-demethylubiquinone-9 3-methyltransferase  50 
 
 
163 aa  156  1e-37  Haliangium ochraceum DSM 14365  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_4903  3-demethylubiquinone-9 3-methyltransferase  44.81 
 
 
159 aa  153  1e-36  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.517944  n/a   
 
 
-
 
NC_009921  Franean1_4069  3-demethylubiquinone-9 3-methyltransferase  48.1 
 
 
158 aa  150  8.999999999999999e-36  Frankia sp. EAN1pec  Bacteria  normal  0.0386051  normal 
 
 
-
 
NC_013757  Gobs_3284  3-demethylubiquinone-9 3-methyltransferase  47.71 
 
 
159 aa  148  3e-35  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.313137  n/a   
 
 
-
 
NC_010725  Mpop_5293  3-demethylubiquinone-9 3-methyltransferase  45.45 
 
 
163 aa  147  6e-35  Methylobacterium populi BJ001  Bacteria  normal  normal  0.405768 
 
 
-
 
NC_010172  Mext_4751  3-demethylubiquinone-9 3-methyltransferase  45.03 
 
 
163 aa  145  3e-34  Methylobacterium extorquens PA1  Bacteria  normal  0.492463  normal 
 
 
-
 
NC_011757  Mchl_5218  3-demethylubiquinone-9 3-methyltransferase  45.03 
 
 
163 aa  144  6e-34  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.57066  normal  0.0284682 
 
 
-
 
NC_010623  Bphy_4083  3-demethylubiquinone-9 3-methyltransferase  47.4 
 
 
158 aa  142  1e-33  Burkholderia phymatum STM815  Bacteria  normal  0.394199  normal 
 
 
-
 
NC_013235  Namu_5222  3-demethylubiquinone-9 3-methyltransferase  49.65 
 
 
159 aa  142  2e-33  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_010681  Bphyt_1272  3-demethylubiquinone-9 3-methyltransferase  47.68 
 
 
157 aa  141  3e-33  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.123176 
 
 
-
 
NC_009719  Plav_3503  3-demethylubiquinone-9 3-methyltransferase  47.06 
 
 
156 aa  138  3e-32  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.936272  normal  0.391713 
 
 
-
 
NC_007951  Bxe_A3278  putative 3-demethylubiquinone-93- methyltransferase protein  49.01 
 
 
156 aa  137  4.999999999999999e-32  Burkholderia xenovorans LB400  Bacteria  normal  0.278374  normal  0.25029 
 
 
-
 
NC_012850  Rleg_2821  3-demethylubiquinone-9 3-methyltransferase  41.33 
 
 
158 aa  137  7.999999999999999e-32  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.30678 
 
 
-
 
NC_008541  Arth_2204  3-demethylubiquinone-9 3-methyltransferase  45.16 
 
 
158 aa  135  2e-31  Arthrobacter sp. FB24  Bacteria  hitchhiker  0.00390727  n/a   
 
 
-
 
NC_007492  Pfl01_2166  3-demethylubiquinone-9 3-methyltransferase  44.17 
 
 
170 aa  134  4e-31  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_013132  Cpin_5547  3-demethylubiquinone-9 3-methyltransferase  44.59 
 
 
157 aa  134  7.000000000000001e-31  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.388463  normal 
 
 
-
 
NC_007778  RPB_4223  3-demethylubiquinone-9 3-methyltransferase  42.31 
 
 
160 aa  133  9e-31  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.153142 
 
 
-
 
NC_009511  Swit_4586  3-demethylubiquinone-9 3-methyltransferase  44.52 
 
 
156 aa  132  1.9999999999999998e-30  Sphingomonas wittichii RW1  Bacteria  normal  normal 
 
 
-
 
NC_007777  Francci3_2914  3-demethylubiquinone-9 3-methyltransferase  43.14 
 
 
157 aa  131  3e-30  Frankia sp. CcI3  Bacteria  normal  0.269995  normal  0.303399 
 
 
-
 
NC_007964  Nham_3519  3-demethylubiquinone-9 3-methyltransferase  45.16 
 
 
157 aa  131  3e-30  Nitrobacter hamburgensis X14  Bacteria  normal  0.194698  n/a   
 
 
-
 
NC_008146  Mmcs_4089  3-demethylubiquinone-9 3-methyltransferase  44.08 
 
 
157 aa  131  3e-30  Mycobacterium sp. MCS  Bacteria  normal  0.0395485  n/a   
 
 
-
 
NC_008705  Mkms_4165  3-demethylubiquinone-9 3-methyltransferase  44.08 
 
 
157 aa  131  3e-30  Mycobacterium sp. KMS  Bacteria  normal  0.982524  normal 
 
 
-
 
NC_009077  Mjls_4319  3-demethylubiquinone-9 3-methyltransferase  44.08 
 
 
157 aa  131  3e-30  Mycobacterium sp. JLS  Bacteria  normal  normal  0.26374 
 
 
-
 
NC_010338  Caul_0726  3-demethylubiquinone-9 3-methyltransferase  42.76 
 
 
159 aa  130  9e-30  Caulobacter sp. K31  Bacteria  normal  0.958881  normal  0.827037 
 
 
-
 
NC_010002  Daci_4027  3-demethylubiquinone-9 3-methyltransferase  42.48 
 
 
167 aa  127  4.0000000000000003e-29  Delftia acidovorans SPH-1  Bacteria  normal  0.560567  normal  0.360128 
 
 
-
 
NC_007908  Rfer_4108  3-demethylubiquinone-9 3-methyltransferase  44.44 
 
 
160 aa  126  1.0000000000000001e-28  Rhodoferax ferrireducens T118  Bacteria  normal  0.105651  n/a   
 
 
-
 
NC_008726  Mvan_4607  3-demethylubiquinone-9 3-methyltransferase  45.1 
 
 
157 aa  124  4.0000000000000003e-28  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.576518  normal 
 
 
-
 
NC_014151  Cfla_2499  3-demethylubiquinone-9 3-methyltransferase  41.22 
 
 
159 aa  124  7e-28  Cellulomonas flavigena DSM 20109  Bacteria  normal  normal 
 
 
-
 
NC_013037  Dfer_1329  3-demethylubiquinone-9 3-methyltransferase  39.74 
 
 
163 aa  123  1e-27  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.998989  normal  0.921915 
 
 
-
 
NC_011894  Mnod_0738  3-demethylubiquinone-9 3-methyltransferase  45.03 
 
 
153 aa  122  3e-27  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.459574  n/a   
 
 
-
 
NC_013739  Cwoe_4234  3-demethylubiquinone-9 3-methyltransferase  41.29 
 
 
159 aa  121  3e-27  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.24428 
 
 
-
 
NC_009078  BURPS1106A_A1642  3-demethylubiquinone-9 3-methyltransferase family protein  43.54 
 
 
220 aa  122  3e-27  Burkholderia pseudomallei 1106a  Bacteria  normal  0.165905  n/a   
 
 
-
 
NC_009832  Spro_2516  3-demethylubiquinone-9 3-methyltransferase  41.18 
 
 
156 aa  122  3e-27  Serratia proteamaculans 568  Bacteria  normal  normal  0.676243 
 
 
-
 
NC_006349  BMAA1066  hypothetical protein  43.54 
 
 
157 aa  121  4e-27  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_008254  Meso_0138  3-demethylubiquinone-9 3-methyltransferase  40.54 
 
 
156 aa  121  4e-27  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_2083  3-demethylubiquinone-9 3-methyltransferase  45.4 
 
 
160 aa  121  4e-27  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.118057  normal 
 
 
-
 
NC_008784  BMASAVP1_0056  3-demethylubiquinone-9 3-methyltransferase family protein  43.54 
 
 
157 aa  121  4e-27  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_008835  BMA10229_0362  3-demethylubiquinone-9 3-methyltransferase family protein  43.54 
 
 
157 aa  121  4e-27  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_009075  BURPS668_A1731  3-demethylubiquinone-9 3-methyltransferase family protein  43.54 
 
 
157 aa  121  4e-27  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_009079  BMA10247_A1223  3-demethylubiquinone-9 3-methyltransferase family protein  43.54 
 
 
157 aa  121  4e-27  Burkholderia mallei NCTC 10247  Bacteria  normal  0.0864274  n/a   
 
 
-
 
NC_007435  BURPS1710b_A0225  3-demethylubiquinone-9 3-methyltransferase family protein  43.54 
 
 
586 aa  120  6e-27  Burkholderia pseudomallei 1710b  Bacteria  normal  0.107059  n/a   
 
 
-
 
NC_008391  Bamb_3373  3-demethylubiquinone-9 3-methyltransferase  46.41 
 
 
157 aa  119  9.999999999999999e-27  Burkholderia ambifaria AMMD  Bacteria  normal  normal 
 
 
-
 
NC_010086  Bmul_4601  3-demethylubiquinone-9 3-methyltransferase  45.1 
 
 
157 aa  119  9.999999999999999e-27  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_007511  Bcep18194_B2104  3-demethylubiquinone-9 3-methyltransferase  46.41 
 
 
157 aa  119  1.9999999999999998e-26  Burkholderia sp. 383  Bacteria  normal  normal  0.171281 
 
 
-
 
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