10 homologs were found in PanDaTox collection
for query gene GM21_1337 on replicon NC_012918
Organism: Geobacter sp. M21



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_012918  GM21_1337  CopG-like DNA-binding protein  100 
 
 
70 aa  131  3.9999999999999996e-30  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.00000429607 
 
 
-
 
NC_007515  Gmet_A3570  CopG-like DNA-binding protein  41.89 
 
 
74 aa  53.5  0.000001  Geobacter metallireducens GS-15  Bacteria  hitchhiker  0.00677722  n/a   
 
 
-
 
NC_013422  Hneap_1626  CopG domain protein DNA-binding domain protein  44.44 
 
 
74 aa  52.4  0.000002  Halothiobacillus neapolitanus c2  Bacteria  hitchhiker  0.00111778  n/a   
 
 
-
 
NC_013946  Mrub_0379  CopG domain-containing protein DNA-binding domain-containing protein  44.12 
 
 
70 aa  49.7  0.00001  Meiothermus ruber DSM 1279  Bacteria  normal  normal 
 
 
-
 
NC_007643  Rru_A3195  helix-turn-helix protein, CopG  46.43 
 
 
74 aa  48.1  0.00004  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_013889  TK90_1569  CopG domain protein DNA-binding domain protein  39.44 
 
 
73 aa  46.2  0.0001  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal 
 
 
-
 
NC_008639  Cpha266_1377  CopG family transcriptional regulator  36.99 
 
 
74 aa  43.5  0.001  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  n/a   
 
 
-
 
NC_011059  Paes_2095  CopG domain protein DNA-binding domain protein  36.99 
 
 
82 aa  42.4  0.002  Prosthecochloris aestuarii DSM 271  Bacteria  normal  normal 
 
 
-
 
NC_010803  Clim_1339  CopG domain protein DNA-binding domain protein  35.62 
 
 
82 aa  41.6  0.003  Chlorobium limicola DSM 245  Bacteria  normal  n/a   
 
 
-
 
NC_009036  Sbal_4391  helix-turn-helix protein, CopG  35.14 
 
 
74 aa  40.8  0.006  Shewanella baltica OS155  Bacteria  normal  normal 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>