20 homologs were found in PanDaTox collection
for query gene Fnod_0203 on replicon NC_009718
Organism: Fervidobacterium nodosum Rt17-B1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_002950  PG1073  D-lysine 5,6-aminomutase, alpha subunit  67.65 
 
 
523 aa  712    Porphyromonas gingivalis W83  Bacteria  n/a    normal  0.720029 
 
 
-
 
NC_009616  Tmel_0196  D-lysine 5,6-aminomutase alpha subunit  75.15 
 
 
520 aa  782    Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_009718  Fnod_0203  D-lysine 56-aminomutase alpha subunit  100 
 
 
516 aa  1056    Fervidobacterium nodosum Rt17-B1  Bacteria  normal  0.3169  n/a   
 
 
-
 
NC_010003  Pmob_1084  D-lysine 56-aminomutase alpha subunit  69.79 
 
 
518 aa  740    Petrotoga mobilis SJ95  Bacteria  normal  n/a   
 
 
-
 
NC_010718  Nther_1906  beta-lysine 5,6-aminomutase alpha subunit, D-lysine 5,6-aminomutase alpha subunit  59.61 
 
 
523 aa  623  1e-177  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_3888  D-lysine 5,6-aminomutase alpha subunit  57.62 
 
 
518 aa  609  1e-173  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_009675  Anae109_2349  D-lysine 56-aminomutase alpha subunit  50.89 
 
 
523 aa  512  1e-144  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.320388  normal  0.0638 
 
 
-
 
NC_007760  Adeh_1483  beta-lysine 5,6-aminomutase alpha subunit / D-lysine 5,6-aminomutase alpha subunit  50.88 
 
 
524 aa  504  1e-141  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.0584517  n/a   
 
 
-
 
NC_013947  Snas_3950  D-Lysine 56-aminomutase subunit alpha  51.66 
 
 
525 aa  504  1e-141  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_011891  A2cp1_2472  D-Lysine 56-aminomutase alpha subunit  51.08 
 
 
524 aa  504  1e-141  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.261377  n/a   
 
 
-
 
NC_011145  AnaeK_2384  D-Lysine 56-aminomutase alpha subunit  51.08 
 
 
524 aa  503  1e-141  Anaeromyxobacter sp. K  Bacteria  normal  0.493151  n/a   
 
 
-
 
NC_008699  Noca_2663  D-lysine 5,6-aminomutase alpha subunit / beta-lysine 5,6-aminomutase alpha subunit  51.54 
 
 
526 aa  496  1e-139  Nocardioides sp. JS614  Bacteria  normal  0.191826  n/a   
 
 
-
 
NC_009953  Sare_2384  D-lysine 56-aminomutase alpha subunit  51.65 
 
 
520 aa  461  9.999999999999999e-129  Salinispora arenicola CNS-205  Bacteria  normal  0.0224895  hitchhiker  0.00032654 
 
 
-
 
NC_009380  Strop_2265  hypothetical protein  51.26 
 
 
520 aa  456  1e-127  Salinispora tropica CNB-440  Bacteria  decreased coverage  0.00000065205  normal  0.10942 
 
 
-
 
NC_011899  Hore_21070  cobalamin B12-binding domain protein  31.48 
 
 
730 aa  147  3e-34  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_010718  Nther_1170  D-Lysine 56-aminomutase alpha subunit  28.8 
 
 
745 aa  144  4e-33  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  unclonable  0.00000000101599  decreased coverage  0.0000623397 
 
 
-
 
NC_010320  Teth514_1481  cobalamin B12-binding domain-containing protein  29.74 
 
 
734 aa  130  8.000000000000001e-29  Thermoanaerobacter sp. X514  Bacteria  hitchhiker  0.00108773  n/a   
 
 
-
 
NC_010003  Pmob_1170  D-lysine 56-aminomutase alpha subunit  30.61 
 
 
732 aa  127  5e-28  Petrotoga mobilis SJ95  Bacteria  normal  0.88369  n/a   
 
 
-
 
NC_009718  Fnod_1642  cobalamin B12-binding domain-containing protein  29.97 
 
 
733 aa  124  3e-27  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  n/a   
 
 
-
 
NC_009616  Tmel_0909  cobalamin B12-binding domain-containing protein  30.45 
 
 
728 aa  118  3e-25  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
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