33 homologs were found in PanDaTox collection
for query gene Elen_1447 on replicon NC_013204
Organism: Eggerthella lenta DSM 2243



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013204  Elen_1447  transcriptional regulator, TetR family  100 
 
 
215 aa  440  1e-123  Eggerthella lenta DSM 2243  Bacteria  normal  0.143895  normal  0.456652 
 
 
-
 
NC_010816  BLD_1104  AcrR family transcriptional regulator  33.95 
 
 
243 aa  99  5e-20  Bifidobacterium longum DJO10A  Bacteria  normal  n/a   
 
 
-
 
NC_013165  Shel_18610  transcriptional regulator, tetR family  45.31 
 
 
89 aa  67  0.0000000002  Slackia heliotrinireducens DSM 20476  Bacteria  normal  0.514394  normal 
 
 
-
 
NC_009012  Cthe_1478  TetR family transcriptional regulator  28.57 
 
 
186 aa  51.6  0.000009  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_013165  Shel_04120  hypothetical protein  29.34 
 
 
195 aa  51.6  0.00001  Slackia heliotrinireducens DSM 20476  Bacteria  normal  0.453544  normal  0.455959 
 
 
-
 
NC_008146  Mmcs_1745  TetR family transcriptional regulator  29.31 
 
 
216 aa  48.1  0.00009  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_1792  TetR family transcriptional regulator  29.31 
 
 
216 aa  48.1  0.00009  Mycobacterium sp. KMS  Bacteria  normal  0.651799  normal 
 
 
-
 
NC_009077  Mjls_1726  TetR family transcriptional regulator  29.31 
 
 
216 aa  48.1  0.00009  Mycobacterium sp. JLS  Bacteria  normal  0.379747  normal 
 
 
-
 
NC_011830  Dhaf_0605  transcriptional regulator, TetR family  38.46 
 
 
204 aa  47.4  0.0002  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.0842361  n/a   
 
 
-
 
NC_013165  Shel_24160  hypothetical protein  51.28 
 
 
194 aa  46.6  0.0003  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal 
 
 
-
 
NC_013165  Shel_00940  transcriptional regulator  33.33 
 
 
180 aa  46.6  0.0003  Slackia heliotrinireducens DSM 20476  Bacteria  normal  0.146478  normal  0.42367 
 
 
-
 
NC_010001  Cphy_0176  TetR family transcriptional regulator  34.62 
 
 
190 aa  46.2  0.0004  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_3983  transcriptional regulator, TetR family  38.89 
 
 
200 aa  45.4  0.0007  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_011830  Dhaf_1709  transcriptional regulator, TetR family  32.89 
 
 
193 aa  44.3  0.001  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_013165  Shel_06360  transcriptional regulator  40.43 
 
 
201 aa  44.3  0.001  Slackia heliotrinireducens DSM 20476  Bacteria  normal  0.589658  normal 
 
 
-
 
NC_011894  Mnod_1550  transcriptional regulator, TetR family  36.76 
 
 
209 aa  43.9  0.002  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.702649  n/a   
 
 
-
 
NC_010571  Oter_3816  TetR family transcriptional regulator  32.97 
 
 
201 aa  43.5  0.003  Opitutus terrae PB90-1  Bacteria  normal  0.0181155  normal  0.234249 
 
 
-
 
NC_013739  Cwoe_1372  transcriptional regulator, TetR family  42.22 
 
 
221 aa  43.1  0.003  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_003909  BCE_4896  AcrR family transcriptional regulator  24.03 
 
 
184 aa  43.1  0.004  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_008148  Rxyl_1792  TetR family transcriptional regulator  36.84 
 
 
198 aa  42.4  0.005  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_013165  Shel_24500  transcriptional regulator  27.13 
 
 
202 aa  42.4  0.006  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_12230  transcriptional regulator  35.9 
 
 
199 aa  41.6  0.008  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_013159  Svir_10440  transcriptional regulator  33.87 
 
 
211 aa  42  0.008  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.0189255  normal  0.0235057 
 
 
-
 
NC_014210  Ndas_4304  transcriptional regulator, TetR family  37.31 
 
 
187 aa  41.6  0.009  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.498529  normal  0.0930958 
 
 
-
 
NC_014158  Tpau_3943  transcriptional regulator, TetR family  35.71 
 
 
218 aa  41.6  0.009  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.938406  n/a   
 
 
-
 
NC_011769  DvMF_2165  transcriptional regulator, TetR family  25.44 
 
 
263 aa  41.6  0.009  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_009632  SaurJH1_2447  regulatory protein TetR  27.71 
 
 
207 aa  41.6  0.009  Staphylococcus aureus subsp. aureus JH1  Bacteria  hitchhiker  0.00212312  n/a   
 
 
-
 
NC_009487  SaurJH9_2401  TetR family transcriptional regulator  27.71 
 
 
207 aa  41.6  0.009  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  0.148693  n/a   
 
 
-
 
NC_008531  LEUM_1892  transcriptional regulator  23.85 
 
 
205 aa  41.6  0.009  Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293  Bacteria  decreased coverage  0.00216331  n/a   
 
 
-
 
NC_007333  Tfu_0412  TetR family transcriptional regulator  36.62 
 
 
216 aa  41.6  0.009  Thermobifida fusca YX  Bacteria  normal  0.742667  n/a   
 
 
-
 
NC_013216  Dtox_2544  transcriptional regulator, TetR family  33.87 
 
 
194 aa  41.6  0.01  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal  0.49291 
 
 
-
 
NC_009338  Mflv_4314  TetR family transcriptional regulator  41.03 
 
 
212 aa  41.6  0.01  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.316546  normal 
 
 
-
 
NC_008751  Dvul_2904  TetR family transcriptional regulator  34.78 
 
 
213 aa  41.6  0.01  Desulfovibrio vulgaris DP4  Bacteria  normal  normal 
 
 
-
 
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