25 homologs were found in PanDaTox collection
for query gene EcolC_2020 on replicon NC_010468
Organism: Escherichia coli ATCC 8739



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_010498  EcSMS35_1588  DNA replication terminus site-binding protein  100 
 
 		 313 aa  634    Escherichia coli SMS-3-5  Bacteria  normal  0.0131189  normal  1 
 
 
-
 
CP001637  EcDH1_2033  DNA replication terminus site-binding protein  99.68 
 
 		 309 aa  631  1e-180  Escherichia coli DH1  Bacteria  hitchhiker  0.00249974  n/a   
 
 
-
 
NC_012892  B21_01569  hypothetical protein  100 
 
 		 309 aa  633  1e-180  Escherichia coli BL21  Bacteria  normal  0.170688  n/a   
 
 
-
 
NC_011353  ECH74115_2321  DNA replication terminus site-binding protein  99.68 
 
 		 313 aa  632  1e-180  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  0.0117783  normal  1 
 
 
-
 
NC_010658  SbBS512_E1797  DNA replication terminus site-binding protein  99.35 
 
 		 309 aa  630  1e-180  Shigella boydii CDC 3083-94  Bacteria  decreased coverage  0.00623944  n/a   
 
 
-
 
NC_010468  EcolC_2020  DNA replication terminus site-binding protein  100 
 
 		 309 aa  633  1e-180  Escherichia coli ATCC 8739  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009801  EcE24377A_1819  DNA replication terminus site-binding protein  99.68 
 
 		 309 aa  632  1e-180  Escherichia coli E24377A  Bacteria  normal  0.0742028  n/a   
 
 
-
 
NC_009800  EcHS_A1685  DNA replication terminus site-binding protein  100 
 
 		 309 aa  633  1e-180  Escherichia coli HS  Bacteria  normal  0.526842  n/a   
 
 
-
 
CP001509  ECD_01579  DNA replication terminus site-binding protein  100 
 
 		 309 aa  633  1e-180  Escherichia coli BL21(DE3)  Bacteria  normal  0.148488  n/a   
 
 
-
 
NC_011205  SeD_A1873  DNA replication terminus site-binding protein  80.26 
 
 		 309 aa  525  1e-148  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  decreased coverage  0.00330018  normal  1 
 
 
-
 
NC_011149  SeAg_B1704  DNA replication terminus site-binding protein  80.58 
 
 		 309 aa  524  1e-148  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  decreased coverage  0.0036741  n/a   
 
 
-
 
NC_011094  SeSA_A1569  DNA replication terminus site-binding protein  80.26 
 
 		 309 aa  525  1e-148  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  decreased coverage  0.00254042  normal  0.0448881 
 
 
-
 
NC_011080  SNSL254_A1579  DNA replication terminus site-binding protein  80.26 
 
 		 309 aa  524  1e-148  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  0.275809  normal  0.641882 
 
 
-
 
NC_011083  SeHA_C1638  DNA replication terminus site-binding protein  80.58 
 
 		 309 aa  526  1e-148  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  0.331585  normal  0.657828 
 
 
-
 
NC_009436  Ent638_1833  DNA replication terminus site-binding protein  69.9 
 
 		 309 aa  455  1e-127  Enterobacter sp. 638  Bacteria  normal  0.102501  hitchhiker  0.00186842 
 
 
-
 
NC_009832  Spro_2280  DNA replication terminus site-binding protein  56.54 
 
 		 312 aa  351  1e-95  Serratia proteamaculans 568  Bacteria  normal  1  normal  0.103128 
 
 
-
 
NC_009708  YpsIP31758_1872  DNA replication terminus site-binding protein  53.75 
 
 		 311 aa  347  1e-94  Yersinia pseudotuberculosis IP 31758  Bacteria  decreased coverage  0.00638426  n/a   
 
 
-
 
NC_010465  YPK_1984  DNA replication terminus site-binding protein  53.75 
 
 		 324 aa  346  2e-94  Yersinia pseudotuberculosis YPIII  Bacteria  normal  0.395704  n/a   
 
 
-
 
NC_012917  PC1_2041  DNA replication terminus site-binding protein  51.47 
 
 		 311 aa  330  1e-89  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.705572  n/a   
 
 
-
 
NC_012912  Dd1591_2136  DNA replication terminus site-binding protein  51.78 
 
 		 308 aa  328  9e-89  Dickeya zeae Ech1591  Bacteria  normal  1  n/a   
 
 
-
 
NC_012880  Dd703_1900  DNA replication terminus site-binding protein  54.4 
 
 		 307 aa  327  1.0000000000000001e-88  Dickeya dadantii Ech703  Bacteria  normal  0.265941  n/a   
 
 
-
 
NC_013421  Pecwa_2342  DNA replication terminus site-binding protein  50.16 
 
 		 312 aa  320  1.9999999999999998e-86  Pectobacterium wasabiae WPP163  Bacteria  normal  1  n/a   
 
 
-
 
NC_009140  SNSL254_pSN254_0183  DNA replication terminus site-binding protein  29.5 
 
 		 291 aa  94.7  2e-18  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  0.0919776  normal  0.0204851 
 
 
-
 
NC_008573  Shewana3_4167  DNA replication terminus site-binding protein  28.57 
 
 		 290 aa  77.4  0.0000000000003  Shewanella sp. ANA-3  Bacteria  normal  1  normal  0.0175773 
 
 
-
 
NC_010159  YpAngola_A2271  DNA replication terminus site-binding protein  54.9 
 
 		 55 aa  66.2  0.0000000006  Yersinia pestis Angola  Bacteria  normal  1  normal  1 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>