4 homologs were found in PanDaTox collection
for query gene EcSMS35_A0004 on replicon NC_010488
Organism: Escherichia coli SMS-3-5



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009786  EcE24377A_F0036  hypothetical protein  95.17 
 
 
591 bp  696    Escherichia coli E24377A  Bacteria  normal  n/a   
 
 
-
 
NC_010488  EcSMS35_A0004    100 
 
 
574 bp  1138    Escherichia coli SMS-3-5  Bacteria  hitchhiker  0.00142781  normal 
 
 
-
 
NC_010660  SbBS512_A0280  hypothetical protein  96.11 
 
 
591 bp  1013    Shigella boydii CDC 3083-94  Bacteria  normal  0.0235416  n/a   
 
 
-
 
NC_011350  ECH74115_B0086  w0003  98.88 
 
 
339 bp  339  5e-91  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  0.170261  normal 
 
 
-
 
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