7 homologs were found in PanDaTox collection
for query gene EcSMS35_2659 on replicon NC_010498
Organism: Escherichia coli SMS-3-5



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010498  EcSMS35_2659  RatA-like protein  100 
 
 
2691 aa  5495    Escherichia coli SMS-3-5  Bacteria  normal  0.319254  normal  0.262746 
 
 
-
 
NC_011080  SNSL254_A2708  hypothetical protein  42.31 
 
 
1859 aa  1239    Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal 
 
 
-
 
NC_011083  SeHA_C2771  hypothetical protein  42.04 
 
 
1859 aa  1224    Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal 
 
 
-
 
NC_011094  SeSA_A2751  RatB  41.38 
 
 
1861 aa  1229    Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  decreased coverage  0.00947302 
 
 
-
 
NC_011149  SeAg_B2665  RatB  41.67 
 
 
1861 aa  1221    Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_011205  SeD_A2881  hypothetical protein  35 
 
 
563 aa  263  2e-68  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  normal 
 
 
-
 
NC_009708  YpsIP31758_0608  putative invasin  37.9 
 
 
2795 aa  125  1.9999999999999998e-26  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
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