8 homologs were found in PanDaTox collection
for query gene EcSMS35_1854 on replicon NC_010498
Organism: Escherichia coli SMS-3-5



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010498  EcSMS35_1854  hypothetical protein  100 
 
 
55 aa  112  1.0000000000000001e-24  Escherichia coli SMS-3-5  Bacteria  normal  0.248698  hitchhiker  1.13248e-19 
 
 
-
 
NC_011353  ECH74115_1909  hypothetical protein  98.18 
 
 
55 aa  111  4.0000000000000004e-24  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  0.0155858  hitchhiker  5.971150000000001e-18 
 
 
-
 
NC_009801  EcE24377A_1477  hypothetical protein  96.36 
 
 
59 aa  109  1.0000000000000001e-23  Escherichia coli E24377A  Bacteria  hitchhiker  0.0000756191  n/a   
 
 
-
 
NC_010658  SbBS512_E1503  hypothetical protein  96.36 
 
 
59 aa  109  1.0000000000000001e-23  Shigella boydii CDC 3083-94  Bacteria  normal  0.0935276  n/a   
 
 
-
 
NC_012892  B21_01263  hypothetical protein  96.36 
 
 
62 aa  109  1.0000000000000001e-23  Escherichia coli BL21  Bacteria  normal  0.219956  n/a   
 
 
-
 
CP001637  EcDH1_2372  conserved hypothetical protein  96.36 
 
 
55 aa  108  2.0000000000000002e-23  Escherichia coli DH1  Bacteria  hitchhiker  0.000404222  n/a   
 
 
-
 
NC_010468  EcolC_2351  hypothetical protein  96.36 
 
 
55 aa  108  2.0000000000000002e-23  Escherichia coli ATCC 8739  Bacteria  hitchhiker  0.00000680242  unclonable  0.0000000153344 
 
 
-
 
NC_009436  Ent638_2193  hypothetical protein  52.27 
 
 
60 aa  53.9  0.0000007  Enterobacter sp. 638  Bacteria  normal  0.719931  hitchhiker  0.0000309208 
 
 
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