45 homologs were found in PanDaTox collection
for query gene EcHS_A2229 on replicon NC_009800
Organism: Escherichia coli HS



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010468  EcolC_1554  PTS system galactitol-specific transporter subunit IIB  100 
 
 
94 aa  193  8.000000000000001e-49  Escherichia coli ATCC 8739  Bacteria  normal  normal 
 
 
-
 
NC_009800  EcHS_A2229  PTS system galactitol-specific transporter subunit IIB  100 
 
 
94 aa  193  8.000000000000001e-49  Escherichia coli HS  Bacteria  normal  0.691967  n/a   
 
 
-
 
NC_009801  EcE24377A_2381  PTS system galactitol-specific transporter subunit IIB  98.94 
 
 
94 aa  192  1e-48  Escherichia coli E24377A  Bacteria  normal  n/a   
 
 
-
 
CP001509  ECD_02019  galactitol-specific enzyme IIB component of PTS  98.94 
 
 
94 aa  191  3e-48  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
NC_010658  SbBS512_E1145  PTS system galactitol-specific transporter subunit IIB  98.94 
 
 
94 aa  191  3e-48  Shigella boydii CDC 3083-94  Bacteria  normal  0.274258  n/a   
 
 
-
 
NC_012892  B21_01985  hypothetical protein  98.94 
 
 
94 aa  191  3e-48  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_010498  EcSMS35_0971  PTS system galactitol-specific transporter subunit IIB  95.74 
 
 
94 aa  189  9e-48  Escherichia coli SMS-3-5  Bacteria  normal  normal  0.366549 
 
 
-
 
NC_011353  ECH74115_3072  PTS system galactitol-specific transporter subunit IIB  95.74 
 
 
94 aa  189  9e-48  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  hitchhiker  0.000248985 
 
 
-
 
NC_011080  SNSL254_A3517  PTS system galactitol-specific transporter subunit IIB  78.72 
 
 
94 aa  160  5.0000000000000005e-39  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  0.210683  normal 
 
 
-
 
NC_011149  SeAg_B3446  PTS system galactitol-specific transporter subunit IIB  78.72 
 
 
94 aa  160  5.0000000000000005e-39  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_011094  SeSA_A3448  PTS system galactitol-specific transporter subunit IIB  78.72 
 
 
94 aa  160  5.0000000000000005e-39  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.605443  normal 
 
 
-
 
NC_011083  SeHA_C3554  PTS system galactitol-specific transporter subunit IIB  78.72 
 
 
94 aa  160  5.0000000000000005e-39  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  0.306895  normal 
 
 
-
 
NC_011205  SeD_A3614  PTS system galactitol-specific transporter subunit IIB  78.72 
 
 
94 aa  160  5.0000000000000005e-39  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.188912  normal 
 
 
-
 
NC_008309  HS_1143  PTS system galactitol-specific transporter subunit IIB  67.02 
 
 
94 aa  142  2e-33  Haemophilus somnus 129PT  Bacteria  normal  n/a   
 
 
-
 
NC_013517  Sterm_3387  phosphotransferase system lactose/cellobiose- specific IIB subunit  58.24 
 
 
92 aa  116  9.999999999999999e-26  Sebaldella termitidis ATCC 33386  Bacteria  hitchhiker  0.0000879799  n/a   
 
 
-
 
NC_009487  SaurJH9_0231  phosphotransferase system, lactose/cellobiose-specific IIB subunit  37.36 
 
 
92 aa  73.9  0.0000000000006  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  n/a   
 
 
-
 
NC_009632  SaurJH1_0237  phosphotransferase system lactose/cellobiose-specific IIB subunit  37.36 
 
 
92 aa  73.9  0.0000000000006  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  n/a   
 
 
-
 
NC_011080  SNSL254_A4064  putative PTS system transporter subunit IIB  37.23 
 
 
95 aa  70.5  0.000000000008  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  0.801033  normal 
 
 
-
 
NC_011083  SeHA_C4114  PTS system IIB component  37.23 
 
 
95 aa  70.5  0.000000000008  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal 
 
 
-
 
NC_011094  SeSA_A3993  putative IIB component of PTS system  37.23 
 
 
95 aa  70.5  0.000000000008  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.971949  normal  0.466757 
 
 
-
 
NC_011149  SeAg_B4009  putative IIB component of PTS system  37.23 
 
 
95 aa  70.5  0.000000000008  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_013517  Sterm_3158  phosphotransferase system lactose/cellobiose- specific IIB subunit  40.43 
 
 
98 aa  70.1  0.00000000001  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_013517  Sterm_0033  phosphotransferase system lactose/cellobiose- specific IIB subunit  38.04 
 
 
94 aa  67.8  0.00000000005  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_010498  EcSMS35_3768  PEP-dependent sugar transporting PTS family, IIB component  36.56 
 
 
93 aa  67.4  0.00000000006  Escherichia coli SMS-3-5  Bacteria  normal  normal 
 
 
-
 
NC_011353  ECH74115_4824  PEP-dependent sugar transporting PTS family, IIB component  35.48 
 
 
93 aa  64.7  0.0000000004  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  normal 
 
 
-
 
NC_011205  SeD_A1729  PTS system lactose/cellobiose-specific transporter subunit IIB  34.78 
 
 
93 aa  63.2  0.000000001  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.0436127  normal  0.448527 
 
 
-
 
NC_013517  Sterm_3751  phosphotransferase system lactose/cellobiose- specific IIB subunit  38.46 
 
 
91 aa  62.8  0.000000002  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_012892  B21_04132  hypothetical protein  35.56 
 
 
92 aa  62.8  0.000000002  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_011094  SeSA_A1730  PTS system, Lactose/Cellobiose specific IIB subunit  34.78 
 
 
93 aa  62.4  0.000000002  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal 
 
 
-
 
CP001509  ECD_04170  predicted enzyme IIB component of PTS  35.56 
 
 
92 aa  62.8  0.000000002  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
CP001637  EcDH1_3695  phosphotransferase system lactose/cellobiose-specific IIB subunit  35.56 
 
 
92 aa  62.8  0.000000002  Escherichia coli DH1  Bacteria  normal  n/a   
 
 
-
 
NC_011080  SNSL254_A1727  PTS system lactose/cellobiose-specific transporter subunit IIB  34.78 
 
 
93 aa  62.4  0.000000002  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  0.542593  normal 
 
 
-
 
NC_011083  SeHA_C1791  PTS system Lactose/Cellobiose specific IIB subunit  34.78 
 
 
93 aa  62.4  0.000000002  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  hitchhiker  0.00423056  normal 
 
 
-
 
NC_011149  SeAg_B1548  PTS system, Lactose/Cellobiose specific IIB subunit  34.78 
 
 
93 aa  62.4  0.000000002  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_013517  Sterm_0215  phosphotransferase system lactose/cellobiose- specific IIB subunit  37.23 
 
 
96 aa  61.6  0.000000004  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_010320  Teth514_0122  response regulator receiver protein  29.35 
 
 
108 aa  50.8  0.000006  Thermoanaerobacter sp. X514  Bacteria  decreased coverage  0.000835049  n/a   
 
 
-
 
NC_009668  Oant_4121  phosphotransferase system lactose/cellobiose-specific IIB subunit  29.07 
 
 
95 aa  50.8  0.000007  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.251352  n/a   
 
 
-
 
NC_010468  EcolC_1646  phosphotransferase system lactose/cellobiose-specific IIB subunit  35.16 
 
 
97 aa  50.4  0.000008  Escherichia coli ATCC 8739  Bacteria  normal  hitchhiker  0.000317921 
 
 
-
 
NC_013203  Apar_0151  phosphotransferase system lactose/cellobiose- specific IIB subunit  29.03 
 
 
93 aa  50.1  0.00001  Atopobium parvulum DSM 20469  Bacteria  normal  normal 
 
 
-
 
NC_013517  Sterm_1733  phosphotransferase system lactose/cellobiose- specific IIB subunit  30.11 
 
 
92 aa  43.9  0.0007  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_013517  Sterm_0031  phosphotransferase system lactose/cellobiose- specific IIB subunit  28.89 
 
 
90 aa  42  0.003  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_008786  Veis_2221  phosphotransferase system, lactose/cellobiose-specific IIB subunit  26.74 
 
 
95 aa  42  0.003  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal  0.99105 
 
 
-
 
NC_008528  OEOE_0236  phosphotransferase system, galactitol-specific IIB component  22.73 
 
 
94 aa  41.2  0.005  Oenococcus oeni PSU-1  Bacteria  normal  n/a   
 
 
-
 
NC_013517  Sterm_3722  phosphotransferase system lactose/cellobiose- specific IIB subunit  30 
 
 
99 aa  40.8  0.007  Sebaldella termitidis ATCC 33386  Bacteria  hitchhiker  0.000000348098  n/a   
 
 
-
 
NC_013172  Bfae_09230  phosphotransferase system, galactitol-specific IIB component  24.72 
 
 
102 aa  40  0.01  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
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