11 homologs were found in PanDaTox collection
for query gene EcE24377A_C0015 on replicon NC_009787
Organism: Escherichia coli E24377A



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009787  EcE24377A_C0015  hypothetical protein  100 
 
 
308 aa  635    Escherichia coli E24377A  Bacteria  normal  0.838494  n/a   
 
 
-
 
NC_009788  EcE24377A_D0011  hypothetical protein  95.45 
 
 
308 aa  613  9.999999999999999e-175  Escherichia coli E24377A  Bacteria  normal  n/a   
 
 
-
 
NC_011081  SeHA_A0041  hypothetical protein  91.88 
 
 
308 aa  590  1e-168  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  0.432272  normal  0.0746912 
 
 
-
 
NC_009790  EcE24377A_E0020  hypothetical protein  91.23 
 
 
308 aa  587  1e-166  Escherichia coli E24377A  Bacteria  decreased coverage  0.00212726  n/a   
 
 
-
 
NC_011350  ECH74115_B0048  hypothetical protein  90.67 
 
 
300 aa  565  1e-160  Escherichia coli O157:H7 str. EC4115  Bacteria  hitchhiker  0.000955656  normal 
 
 
-
 
NC_009832  Spro_4056  hypothetical protein  34.65 
 
 
313 aa  186  6e-46  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_009832  Spro_0397  hypothetical protein  35.64 
 
 
307 aa  182  5.0000000000000004e-45  Serratia proteamaculans 568  Bacteria  normal  0.567946  normal  0.20063 
 
 
-
 
NC_009832  Spro_4121  hypothetical protein  37.05 
 
 
307 aa  179  4e-44  Serratia proteamaculans 568  Bacteria  normal  0.442836  normal 
 
 
-
 
NC_009708  YpsIP31758_3689  hypothetical protein  33.33 
 
 
301 aa  172  7.999999999999999e-42  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_009801  EcE24377A_3369  IS21 family transposition helper protein  36.84 
 
 
275 aa  58.9  0.0000001  Escherichia coli E24377A  Bacteria  normal  n/a   
 
 
-
 
NC_011761  AFE_1327  hypothetical protein  32.33 
 
 
251 aa  44.7  0.002  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  0.0473918  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>