5 homologs were found in PanDaTox collection
for query gene ECH74115_B0088 on replicon NC_011350
Organism: Escherichia coli O157:H7 str. EC4115



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_011350  ECH74115_B0088  CopA-like RNA  100 
 
 		 89 bp  176  6e-43  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  0.0824959  normal  1 
 
 
-
 
NC_010660  SbBS512_A0319  CopA-like RNA  91.46 
 
 		 90 bp  99.6  1e-19  Shigella boydii CDC 3083-94  Bacteria  hitchhiker  0.00000593512  n/a   
 
 
-
 
NC_010660  SbBS512_A0282    88.52 
 
 		 126 bp  58  0.0000004  Shigella boydii CDC 3083-94  Bacteria  hitchhiker  0.0000120931  n/a   
 
 
-
 
NC_010157  YpAngola_B0098  CopA-like RNA  96.15 
 
 		 90 bp  44.1  0.005  Yersinia pestis Angola  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011204  SeD_B0068  CopA-like RNA  100 
 
 		 88 bp  44.1  0.005  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  1  normal  1 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>