9 homologs were found in PanDaTox collection
for query gene ECD_10057 on replicon CP001509
Organism: Escherichia coli BL21(DE3)



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
CP001509  ECD_10057  Tail fiber  100 
 
 
87 aa  172  9.999999999999999e-43  Escherichia coli BL21(DE3)  Bacteria  normal  0.42641  n/a   
 
 
-
 
NC_012892  B21_00754  hypothetical protein  100 
 
 
68 aa  135  3.0000000000000003e-31  Escherichia coli BL21  Bacteria  normal  0.529655  n/a   
 
 
-
 
NC_011080  SNSL254_A1178  side tail fiber protein  65.52 
 
 
510 aa  78.2  0.00000000000004  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  0.205878  normal  0.102671 
 
 
-
 
NC_010498  EcSMS35_4341  putative phage tail fiber protein  70 
 
 
673 aa  75.5  0.0000000000002  Escherichia coli SMS-3-5  Bacteria  normal  normal  0.0213021 
 
 
-
 
NC_010658  SbBS512_E1941  gpH  74.6 
 
 
570 aa  75.5  0.0000000000002  Shigella boydii CDC 3083-94  Bacteria  normal  n/a   
 
 
-
 
NC_009436  Ent638_0819  hypothetical protein  59.65 
 
 
264 aa  72.8  0.000000000001  Enterobacter sp. 638  Bacteria  normal  normal 
 
 
-
 
NC_009800  EcHS_A0940  tail fiber domain-containing protein  68.42 
 
 
583 aa  56.6  0.0000001  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_009636  Smed_1639  hypothetical protein  41.43 
 
 
374 aa  46.2  0.0001  Sinorhizobium medicae WSM419  Bacteria  normal  0.640839  normal  0.175401 
 
 
-
 
NC_009636  Smed_1872  hypothetical protein  40 
 
 
374 aa  45.1  0.0003  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.573397 
 
 
-
 
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