More than 300 homologs were found in PanDaTox collection
for query gene DvMF_1793 on replicon NC_011769
Organism: Desulfovibrio vulgaris str. 'Miyazaki F'



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011769  DvMF_1793  3-isopropylmalate dehydratase small subunit  100 
 
 
163 aa  335  1.9999999999999998e-91  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.845363 
 
 
-
 
NC_008751  Dvul_0389  3-isopropylmalate dehydratase small subunit  85.8 
 
 
167 aa  294  3e-79  Desulfovibrio vulgaris DP4  Bacteria  normal  0.373722  normal 
 
 
-
 
NC_011883  Ddes_0507  3-isopropylmalate dehydratase small subunit  81.6 
 
 
165 aa  282  2.0000000000000002e-75  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  n/a   
 
 
-
 
NC_007519  Dde_3220  3-isopropylmalate dehydratase small subunit  74.23 
 
 
167 aa  263  5.999999999999999e-70  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_013223  Dret_1457  3-isopropylmalate dehydratase small subunit  70.99 
 
 
167 aa  249  8.000000000000001e-66  Desulfohalobium retbaense DSM 5692  Bacteria  normal  0.376362  normal  0.219232 
 
 
-
 
NC_013173  Dbac_1741  3-isopropylmalate dehydratase small subunit  64.42 
 
 
164 aa  212  1.9999999999999998e-54  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_2988  3-isopropylmalate dehydratase, small subunit  55.21 
 
 
165 aa  189  2e-47  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.169045  normal 
 
 
-
 
NC_008554  Sfum_3030  3-isopropylmalate dehydratase, small subunit  55.21 
 
 
165 aa  189  2e-47  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal  0.538319 
 
 
-
 
NC_013204  Elen_0584  3-isopropylmalate dehydratase, small subunit  53.7 
 
 
165 aa  187  5e-47  Eggerthella lenta DSM 2243  Bacteria  hitchhiker  0.00990382  normal 
 
 
-
 
NC_011661  Dtur_1192  3-isopropylmalate dehydratase, small subunit  53.7 
 
 
168 aa  187  5.999999999999999e-47  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_010424  Daud_0357  3-isopropylmalate dehydratase, small subunit  53.37 
 
 
164 aa  180  7e-45  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  0.427238  n/a   
 
 
-
 
NC_011898  Ccel_0127  3-isopropylmalate dehydratase small subunit  50.92 
 
 
163 aa  179  1e-44  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_013552  DhcVS_731  3-isopropylmalate dehydratase, small subunit  53.16 
 
 
166 aa  178  2.9999999999999997e-44  Dehalococcoides sp. VS  Bacteria  normal  0.0550473  n/a   
 
 
-
 
NC_010320  Teth514_0016  3-isopropylmalate dehydratase small subunit  52.83 
 
 
160 aa  178  2.9999999999999997e-44  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_002936  DET0827  3-isopropylmalate dehydratase small subunit  53.16 
 
 
166 aa  178  4e-44  Dehalococcoides ethenogenes 195  Bacteria  normal  n/a   
 
 
-
 
NC_009455  DehaBAV1_0746  3-isopropylmalate dehydratase small subunit  52.53 
 
 
166 aa  176  9e-44  Dehalococcoides sp. BAV1  Bacteria  hitchhiker  0.0039277  n/a   
 
 
-
 
NC_012034  Athe_2100  3-isopropylmalate dehydratase small subunit  50.62 
 
 
166 aa  176  2e-43  Anaerocellum thermophilum DSM 6725  Bacteria  hitchhiker  0.00749076  n/a   
 
 
-
 
NC_008346  Swol_2141  3-isopropylmalate dehydratase, small subunit  52.8 
 
 
163 aa  173  9.999999999999999e-43  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_0287  3-isopropylmalate dehydratase, small subunit  50 
 
 
166 aa  172  1.9999999999999998e-42  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_013216  Dtox_0597  3-isopropylmalate dehydrogenase  51.85 
 
 
523 aa  170  7.999999999999999e-42  Desulfotomaculum acetoxidans DSM 771  Bacteria  decreased coverage  0.00000598819  normal 
 
 
-
 
NC_013385  Adeg_0228  3-isopropylmalate dehydratase, small subunit  53.16 
 
 
163 aa  168  2e-41  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_014150  Bmur_2221  3-isopropylmalate dehydratase, small subunit  47.83 
 
 
162 aa  167  8e-41  Brachyspira murdochii DSM 12563  Bacteria  normal  n/a   
 
 
-
 
NC_010001  Cphy_3355  3-isopropylmalate dehydratase small subunit  46.91 
 
 
165 aa  166  1e-40  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_009012  Cthe_2210  3-isopropylmalate dehydratase, small subunit  46.91 
 
 
189 aa  165  2e-40  Clostridium thermocellum ATCC 27405  Bacteria  decreased coverage  0.0000117372  n/a   
 
 
-
 
NC_010730  SYO3AOP1_0338  3-isopropylmalate dehydratase, small subunit  47.47 
 
 
165 aa  162  1.0000000000000001e-39  Sulfurihydrogenibium sp. YO3AOP1  Bacteria  hitchhiker  0.0000000000213768  n/a   
 
 
-
 
NC_009802  CCC13826_0035  3-isopropylmalate dehydratase small subunit  47.47 
 
 
161 aa  161  5.0000000000000005e-39  Campylobacter concisus 13826  Bacteria  normal  0.158163  n/a   
 
 
-
 
NC_009975  MmarC6_0816  3-isopropylmalate dehydratase, small subunit  49.06 
 
 
167 aa  160  6e-39  Methanococcus maripaludis C6  Archaea  normal  n/a   
 
 
-
 
NC_009635  Maeo_0347  3-isopropylmalate dehydratase, small subunit  46.54 
 
 
168 aa  160  9e-39  Methanococcus aeolicus Nankai-3  Archaea  normal  0.135127  n/a   
 
 
-
 
NC_009135  MmarC5_1540  3-isopropylmalate dehydratase, small subunit  48.43 
 
 
167 aa  160  1e-38  Methanococcus maripaludis C5  Archaea  normal  n/a   
 
 
-
 
NC_007355  Mbar_A1338  3-isopropylmalate dehydratase small subunit  48.72 
 
 
162 aa  160  1e-38  Methanosarcina barkeri str. Fusaro  Archaea  normal  normal 
 
 
-
 
NC_013522  Taci_1611  3-isopropylmalate dehydratase, small subunit  48.45 
 
 
167 aa  159  1e-38  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  n/a   
 
 
-
 
NC_013170  Ccur_04380  3-isopropylmalate dehydratase, small subunit  45.68 
 
 
178 aa  159  2e-38  Cryptobacterium curtum DSM 15641  Bacteria  normal  normal  0.96235 
 
 
-
 
NC_011899  Hore_10880  3-isopropylmalate dehydratase, small subunit  47.8 
 
 
165 aa  158  2e-38  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_009637  MmarC7_1135  3-isopropylmalate dehydratase, small subunit  47.8 
 
 
167 aa  157  6e-38  Methanococcus maripaludis C7  Archaea  normal  normal 
 
 
-
 
NC_009634  Mevan_1141  3-isopropylmalate dehydratase, small subunit  48.1 
 
 
167 aa  157  6e-38  Methanococcus vannielii SB  Archaea  normal  0.685222  n/a   
 
 
-
 
NC_007575  Suden_1102  3-isopropylmalate dehydratase small subunit  48.1 
 
 
167 aa  157  7e-38  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  n/a   
 
 
-
 
NC_009715  CCV52592_1364  alginate O-acetylation protein  46.2 
 
 
160 aa  157  8e-38  Campylobacter curvus 525.92  Bacteria  normal  0.0200194  n/a   
 
 
-
 
NC_008599  CFF8240_1021  3-isopropylmalate dehydratase small subunit  48.7 
 
 
159 aa  157  9e-38  Campylobacter fetus subsp. fetus 82-40  Bacteria  hitchhiker  0.0000213685  n/a   
 
 
-
 
NC_011830  Dhaf_2486  3-isopropylmalate dehydratase, small subunit  49.02 
 
 
162 aa  154  3e-37  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_009714  CHAB381_1265  3-isopropylmalate dehydratase small subunit  46.75 
 
 
159 aa  154  4e-37  Campylobacter hominis ATCC BAA-381  Bacteria  normal  n/a   
 
 
-
 
NC_009635  Maeo_0652  3-isopropylmalate dehydratase, small subunit  45.45 
 
 
165 aa  153  8e-37  Methanococcus aeolicus Nankai-3  Archaea  normal  n/a   
 
 
-
 
NC_010003  Pmob_1587  3-isopropylmalate dehydratase, small subunit  42.94 
 
 
164 aa  152  1e-36  Petrotoga mobilis SJ95  Bacteria  normal  n/a   
 
 
-
 
NC_011126  HY04AAS1_0441  3-isopropylmalate dehydratase, small subunit  45.73 
 
 
165 aa  151  4e-36  Hydrogenobaculum sp. Y04AAS1  Bacteria  normal  0.969002  n/a   
 
 
-
 
NC_008553  Mthe_0024  3-isopropylmalate dehydratase small subunit  46.79 
 
 
161 aa  150  1e-35  Methanosaeta thermophila PT  Archaea  normal  0.321106  n/a   
 
 
-
 
NC_009712  Mboo_2076  3-isopropylmalate dehydratase, small subunit  50.33 
 
 
165 aa  149  1e-35  Candidatus Methanoregula boonei 6A8  Archaea  normal  0.894184  normal 
 
 
-
 
NC_007955  Mbur_1631  3-isopropylmalate dehydratase small subunit  49.36 
 
 
160 aa  149  2e-35  Methanococcoides burtonii DSM 6242  Archaea  hitchhiker  0.00197454  n/a   
 
 
-
 
NC_009051  Memar_1948  3-isopropylmalate dehydratase, small subunit  51.32 
 
 
163 aa  149  2e-35  Methanoculleus marisnigri JR1  Archaea  normal  0.353439  n/a   
 
 
-
 
NC_012029  Hlac_1103  3-isopropylmalate dehydratase, small subunit  46.2 
 
 
175 aa  147  4e-35  Halorubrum lacusprofundi ATCC 49239  Archaea  normal  normal 
 
 
-
 
NC_008025  Dgeo_1032  3-isopropylmalate dehydratase small subunit  50 
 
 
174 aa  146  1.0000000000000001e-34  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.118082  hitchhiker  0.00124766 
 
 
-
 
NC_011898  Ccel_1621  3-isopropylmalate dehydratase, small subunit  41.98 
 
 
166 aa  145  2.0000000000000003e-34  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_007644  Moth_2253  3-isopropylmalate dehydratase small subunit  51.85 
 
 
166 aa  146  2.0000000000000003e-34  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal 
 
 
-
 
NC_011832  Mpal_0186  3-isopropylmalate dehydratase, small subunit  51.66 
 
 
165 aa  144  4.0000000000000006e-34  Methanosphaerula palustris E1-9c  Archaea  normal  0.388139  normal  0.0344382 
 
 
-
 
NC_009253  Dred_2337  3-isopropylmalate dehydratase, small subunit  45.34 
 
 
166 aa  144  4.0000000000000006e-34  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_008346  Swol_0377  3-isopropylmalate dehydratase, small subunit family protein  45.34 
 
 
166 aa  144  5e-34  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  n/a   
 
 
-
 
NC_009637  MmarC7_1379  3-isopropylmalate dehydratase, small subunit  43.12 
 
 
161 aa  144  6e-34  Methanococcus maripaludis C7  Archaea  normal  normal  0.132083 
 
 
-
 
NC_013526  Tter_2763  3-isopropylmalate dehydratase, small subunit  48.34 
 
 
159 aa  143  9e-34  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.445719  n/a   
 
 
-
 
NC_013512  Sdel_1517  3-isopropylmalate dehydratase, small subunit  45.28 
 
 
162 aa  143  9e-34  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  0.292796  n/a   
 
 
-
 
NC_009135  MmarC5_1257  3-isopropylmalate dehydratase, small subunit  42.86 
 
 
161 aa  142  2e-33  Methanococcus maripaludis C5  Archaea  normal  0.147077  n/a   
 
 
-
 
NC_010483  TRQ2_0382  3-isopropylmalate dehydratase small subunit  44.94 
 
 
164 aa  142  2e-33  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_009975  MmarC6_0529  3-isopropylmalate dehydratase, small subunit  43.12 
 
 
161 aa  142  2e-33  Methanococcus maripaludis C6  Archaea  normal  n/a   
 
 
-
 
NC_009634  Mevan_1368  3-isopropylmalate dehydratase, small subunit  43.21 
 
 
161 aa  140  5e-33  Methanococcus vannielii SB  Archaea  normal  0.205096  n/a   
 
 
-
 
NC_009486  Tpet_0365  3-isopropylmalate dehydratase small subunit  45.45 
 
 
166 aa  140  7e-33  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_007796  Mhun_2362  3-isopropylmalate dehydratase, small subunit  46.36 
 
 
162 aa  140  8e-33  Methanospirillum hungatei JF-1  Archaea  normal  normal  0.478432 
 
 
-
 
NC_013926  Aboo_1465  3-isopropylmalate dehydratase, small subunit  46.5 
 
 
168 aa  140  9e-33  Aciduliprofundum boonei T469  Archaea  hitchhiker  0.00596899  n/a   
 
 
-
 
NC_009767  Rcas_3517  3-isopropylmalate dehydratase, small subunit  47.47 
 
 
170 aa  140  9e-33  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_008942  Mlab_0608  3-isopropylmalate dehydratase, small subunit  49.03 
 
 
158 aa  140  9.999999999999999e-33  Methanocorpusculum labreanum Z  Archaea  normal  0.864497  normal  0.293783 
 
 
-
 
NC_011661  Dtur_1631  3-isopropylmalate dehydratase, small subunit  43.56 
 
 
166 aa  139  1.9999999999999998e-32  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_009455  DehaBAV1_0426  3-isopropylmalate dehydratase small subunit  45.86 
 
 
167 aa  138  3e-32  Dehalococcoides sp. BAV1  Bacteria  normal  n/a   
 
 
-
 
NC_010424  Daud_1037  3-isopropylmalate dehydratase, small subunit  44.72 
 
 
166 aa  138  3e-32  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
NC_013385  Adeg_1101  3-isopropylmalate dehydratase, small subunit  44.59 
 
 
166 aa  138  3.9999999999999997e-32  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_002936  DET0449  3-isopropylmalate dehydratase small subunit  45.22 
 
 
167 aa  138  3.9999999999999997e-32  Dehalococcoides ethenogenes 195  Bacteria  normal  0.844567  n/a   
 
 
-
 
NC_010003  Pmob_1705  3-isopropylmalate dehydratase, small subunit  44.1 
 
 
167 aa  137  6e-32  Petrotoga mobilis SJ95  Bacteria  normal  n/a   
 
 
-
 
NC_008553  Mthe_0853  3-isopropylmalate dehydratase, small subunit  46.2 
 
 
161 aa  137  7.999999999999999e-32  Methanosaeta thermophila PT  Archaea  normal  n/a   
 
 
-
 
NC_009073  Pcal_1603  3-isopropylmalate dehydratase small subunit  46.58 
 
 
161 aa  137  8.999999999999999e-32  Pyrobaculum calidifontis JCM 11548  Archaea  n/a    normal 
 
 
-
 
NC_007355  Mbar_A0244  3-isopropylmalate dehydratase, small subunit  48.1 
 
 
165 aa  135  2e-31  Methanosarcina barkeri str. Fusaro  Archaea  normal  normal 
 
 
-
 
NC_010525  Tneu_0831  3-isopropylmalate dehydratase small subunit  47.17 
 
 
162 aa  135  2e-31  Thermoproteus neutrophilus V24Sta  Archaea  normal  normal 
 
 
-
 
NC_013552  DhcVS_391  aconitase/homoaconitase C-terminal domain protein, 3-isopropylmalate dehydratase small subunit  43.95 
 
 
167 aa  135  3.0000000000000003e-31  Dehalococcoides sp. VS  Bacteria  normal  n/a   
 
 
-
 
NC_009376  Pars_2062  3-isopropylmalate dehydratase small subunit  45.62 
 
 
160 aa  134  4e-31  Pyrobaculum arsenaticum DSM 13514  Archaea  normal  normal  0.127412 
 
 
-
 
NC_007355  Mbar_A2270  3-isopropylmalate dehydratase  44.87 
 
 
163 aa  131  3e-30  Methanosarcina barkeri str. Fusaro  Archaea  normal  0.310524  normal  0.0869974 
 
 
-
 
NC_010483  TRQ2_0645  3-isopropylmalate dehydratase small subunit  42.04 
 
 
166 aa  132  3e-30  Thermotoga sp. RQ2  Bacteria  normal  0.014767  n/a   
 
 
-
 
NC_009486  Tpet_0620  3-isopropylmalate dehydratase small subunit  42.04 
 
 
166 aa  131  3e-30  Thermotoga petrophila RKU-1  Bacteria  normal  0.0153606  n/a   
 
 
-
 
NC_007955  Mbur_1578  3-isopropylmalate dehydratase, small subunit  46.41 
 
 
163 aa  130  6e-30  Methanococcoides burtonii DSM 6242  Archaea  normal  0.0376678  n/a   
 
 
-
 
NC_008701  Pisl_1813  3-isopropylmalate dehydratase small subunit  44.65 
 
 
161 aa  130  7.999999999999999e-30  Pyrobaculum islandicum DSM 4184  Archaea  normal  hitchhiker  0.00000193523 
 
 
-
 
NC_010644  Emin_0403  3-isopropylmalate dehydratase small subunit  40.76 
 
 
164 aa  128  3e-29  Elusimicrobium minutum Pei191  Bacteria  normal  normal  0.583067 
 
 
-
 
NC_010085  Nmar_0421  3-isopropylmalate dehydratase small subunit  41.89 
 
 
160 aa  125  2.0000000000000002e-28  Nitrosopumilus maritimus SCM1  Archaea  n/a    normal  0.0517519 
 
 
-
 
NC_013926  Aboo_0128  3-isopropylmalate dehydratase, small subunit  37.97 
 
 
163 aa  124  4.0000000000000003e-28  Aciduliprofundum boonei T469  Archaea  normal  0.225854  n/a   
 
 
-
 
NC_009767  Rcas_3472  homoaconitate hydratase small subunit  41.56 
 
 
166 aa  122  2e-27  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.0185812 
 
 
-
 
NC_011831  Cagg_3601  3-isopropylmalate dehydratase small subunit  42.11 
 
 
166 aa  121  3e-27  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal  0.162666 
 
 
-
 
NC_013522  Taci_1365  3-isopropylmalate dehydratase, small subunit  40.85 
 
 
172 aa  122  3e-27  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  n/a   
 
 
-
 
NC_009954  Cmaq_1173  3-isopropylmalate dehydratase small subunit  45.22 
 
 
175 aa  121  4e-27  Caldivirga maquilingensis IC-167  Archaea  normal  normal  0.595401 
 
 
-
 
NC_007348  Reut_B5386  3-isopropylmalate dehydratase, small subunit  39.51 
 
 
168 aa  120  6e-27  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_011832  Mpal_2144  3-isopropylmalate dehydratase, small subunit  44.72 
 
 
156 aa  120  8e-27  Methanosphaerula palustris E1-9c  Archaea  normal  normal 
 
 
-
 
NC_009523  RoseRS_1056  homoaconitate hydratase small subunit  40.26 
 
 
166 aa  119  1.9999999999999998e-26  Roseiflexus sp. RS-1  Bacteria  normal  0.23213  normal 
 
 
-
 
NC_013522  Taci_1367  3-isopropylmalate dehydratase, small subunit  36.81 
 
 
164 aa  116  9.999999999999999e-26  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  n/a   
 
 
-
 
CP001800  Ssol_0274  3-isopropylmalate dehydratase, small subunit  41.72 
 
 
165 aa  114  3.9999999999999997e-25  Sulfolobus solfataricus 98/2  Archaea  normal  0.449089  n/a   
 
 
-
 
NC_009440  Msed_0829  3-isopropylmalate dehydratase small subunit  40.62 
 
 
161 aa  114  6e-25  Metallosphaera sedula DSM 5348  Archaea  normal  normal 
 
 
-
 
NC_007974  Rmet_5867  3-isopropylmalate dehydratase, small subunit  42.24 
 
 
170 aa  114  6.9999999999999995e-25  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_009972  Haur_3303  3-isopropylmalate dehydratase small subunit  39.22 
 
 
165 aa  112  2.0000000000000002e-24  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.978934  n/a   
 
 
-
 
NC_010718  Nther_2158  3-isopropylmalate dehydratase, small subunit  39.87 
 
 
185 aa  112  2.0000000000000002e-24  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  normal  0.350414 
 
 
-
 
NC_013517  Sterm_0113  3-isopropylmalate dehydratase, small subunit  40.35 
 
 
181 aa  110  9e-24  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
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