14 homologs were found in PanDaTox collection
for query gene Dtpsy_0219 on replicon NC_011992
Organism: Acidovorax ebreus TPSY



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011992  Dtpsy_0219  hypothetical protein  100 
 
 
180 aa  346  1e-94  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_007643  Rru_A2315  PepSY-associated TM helix  59.42 
 
 
555 aa  150  1e-35  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.650173  n/a   
 
 
-
 
NC_008322  Shewmr7_3578  PepSY-associated TM helix domain-containing protein  44.44 
 
 
539 aa  115  5e-25  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_008321  Shewmr4_0451  PepSY-associated TM helix domain-containing protein  43.75 
 
 
539 aa  112  4.0000000000000004e-24  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_0447  response regulator receiver protein  41.33 
 
 
539 aa  111  6e-24  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_009438  Sputcn32_3395  PepSY-associated TM helix domain-containing protein  40.79 
 
 
540 aa  109  3e-23  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_004347  SO_0449  hypothetical protein  42.75 
 
 
539 aa  97.8  6e-20  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_008345  Sfri_3222  PepSY-associated TM helix domain-containing protein  31.25 
 
 
529 aa  86.3  2e-16  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.43081  n/a   
 
 
-
 
NC_007973  Rmet_1365  PepSY-associated TM helix  42.04 
 
 
543 aa  84.7  7e-16  Cupriavidus metallidurans CH34  Bacteria  normal  0.708347  normal  0.863113 
 
 
-
 
NC_009997  Sbal195_3482  PepSY-associated TM helix domain-containing protein  33.33 
 
 
525 aa  82.8  0.000000000000002  Shewanella baltica OS195  Bacteria  normal  0.700235  hitchhiker  0.00378927 
 
 
-
 
NC_011663  Sbal223_2169  PepSY-associated TM helix domain protein  32.62 
 
 
534 aa  83.2  0.000000000000002  Shewanella baltica OS223  Bacteria  normal  0.461921  hitchhiker  0.00144666 
 
 
-
 
NC_007954  Sden_0618  PepSY-associated TM helix  30.67 
 
 
547 aa  72.8  0.000000000002  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_003296  RS02200  hypothetical protein  37.89 
 
 
540 aa  70.5  0.00000000001  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_011071  Smal_2808  PepSY-associated TM helix domain protein  38.46 
 
 
519 aa  55.1  0.0000005  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal 
 
 
-
 
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