5 homologs were found in PanDaTox collection
for query gene Dshi_4208 on replicon NC_009959
Organism: Dinoroseobacter shibae DFL 12



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009959  Dshi_4208  hypothetical protein  100 
 
 
180 aa  360  4e-99  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal  0.967071 
 
 
-
 
NC_007912  Sde_2536  CBS  32.82 
 
 
149 aa  65.5  0.0000000003  Saccharophagus degradans 2-40  Bacteria  normal  normal  0.179324 
 
 
-
 
NC_008345  Sfri_1827  hypothetical protein  33.08 
 
 
143 aa  56.6  0.0000002  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.388117  n/a   
 
 
-
 
NC_003910  CPS_4709  hypothetical protein  30.77 
 
 
137 aa  54.3  0.0000009  Colwellia psychrerythraea 34H  Bacteria  normal  0.314693  n/a   
 
 
-
 
NC_007484  Noc_1024  hypothetical protein  31.87 
 
 
145 aa  42.7  0.003  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
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