9 homologs were found in PanDaTox collection
for query gene Dshi_4002 on replicon NC_009957
Organism: Dinoroseobacter shibae DFL 12



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009957  Dshi_4002  hypothetical protein  100 
 
 
128 aa  265  2e-70  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.897228  n/a   
 
 
-
 
NC_009955  Dshi_3693  hypothetical protein  93.75 
 
 
128 aa  252  2.0000000000000002e-66  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal 
 
 
-
 
NC_008048  Sala_2657  hypothetical protein  34.51 
 
 
155 aa  81.6  0.000000000000003  Sphingopyxis alaskensis RB2256  Bacteria  normal  0.809022  normal  0.200024 
 
 
-
 
NC_009668  Oant_3165  hypothetical protein  34.42 
 
 
162 aa  73.2  0.000000000001  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.813926  n/a   
 
 
-
 
NC_009720  Xaut_0729  hypothetical protein  34.53 
 
 
159 aa  70.1  0.000000000009  Xanthobacter autotrophicus Py2  Bacteria  normal  0.10867  normal  0.994317 
 
 
-
 
NC_007794  Saro_2192  hypothetical protein  25.93 
 
 
153 aa  53.5  0.000001  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_011761  AFE_1302  hypothetical protein  32.04 
 
 
114 aa  53.1  0.000001  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  0.474153  n/a   
 
 
-
 
NC_008048  Sala_0424  hypothetical protein  27.41 
 
 
153 aa  52.4  0.000002  Sphingopyxis alaskensis RB2256  Bacteria  normal  0.114927  normal  0.342394 
 
 
-
 
NC_009507  Swit_5184  hypothetical protein  29.5 
 
 
156 aa  48.5  0.00003  Sphingomonas wittichii RW1  Bacteria  normal  0.181222  normal 
 
 
-
 
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