12 homologs were found in PanDaTox collection
for query gene Dshi_3873 on replicon NC_009956
Organism: Dinoroseobacter shibae DFL 12



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009956  Dshi_3873  hypothetical protein  100 
 
 
194 aa  392  1e-108  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal  0.950409 
 
 
-
 
NC_009952  Dshi_1310  hypothetical protein  32.97 
 
 
292 aa  84.7  8e-16  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.0329016  normal  0.0607944 
 
 
-
 
NC_009943  Dole_1794  sulfotransferase  29.88 
 
 
308 aa  65.5  0.0000000004  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_009719  Plav_1332  hypothetical protein  30.22 
 
 
280 aa  65.5  0.0000000005  Parvibaculum lavamentivorans DS-1  Bacteria  normal  hitchhiker  0.0000000259253 
 
 
-
 
NC_008699  Noca_1949  hypothetical protein  31.44 
 
 
294 aa  60.8  0.00000001  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_008820  P9303_25521  hypothetical protein  33.83 
 
 
283 aa  60.1  0.00000002  Prochlorococcus marinus str. MIT 9303  Bacteria  n/a    normal 
 
 
-
 
NC_009952  Dshi_1715  hypothetical protein  30.77 
 
 
281 aa  51.2  0.000008  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal  0.0404852 
 
 
-
 
NC_007513  Syncc9902_0205  hypothetical protein  32.1 
 
 
275 aa  49.3  0.00003  Synechococcus sp. CC9902  Bacteria  normal  n/a   
 
 
-
 
NC_007516  Syncc9605_0174  hypothetical protein  26.47 
 
 
276 aa  44.3  0.001  Synechococcus sp. CC9605  Bacteria  normal  normal  0.0591862 
 
 
-
 
NC_008686  Pden_2009  sulfotransferase  28.25 
 
 
285 aa  43.9  0.001  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_009511  Swit_4005  sulfotransferase  24.71 
 
 
256 aa  42.7  0.003  Sphingomonas wittichii RW1  Bacteria  normal  normal 
 
 
-
 
NC_007777  Francci3_2395  sulfotransferase  31.25 
 
 
311 aa  41.6  0.007  Frankia sp. CcI3  Bacteria  decreased coverage  0.009967  normal  0.0858519 
 
 
-
 
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