6 homologs were found in PanDaTox collection
for query gene Dshi_3689 on replicon NC_009955
Organism: Dinoroseobacter shibae DFL 12



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009955  Dshi_3689  hypothetical protein  100 
 
 
66 aa  137  3.9999999999999997e-32  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.476561  normal 
 
 
-
 
NC_009955  Dshi_3683  resolvase domain-containing protein  78.57 
 
 
215 aa  65.5  0.0000000003  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_2668  helix-turn-helix, Fis-type  66.67 
 
 
204 aa  58.5  0.00000003  Pseudomonas syringae pv. syringae B728a  Bacteria  hitchhiker  0.00804941  normal 
 
 
-
 
NC_011083  SeHA_C1568  helix-turn-helix, Fis-type  66.67 
 
 
204 aa  58.5  0.00000003  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal 
 
 
-
 
NC_009092  Shew_0991  resolvase domain-containing protein  54.55 
 
 
205 aa  50.8  0.000007  Shewanella loihica PV-4  Bacteria  normal  0.0378771  normal 
 
 
-
 
NC_011986  Avi_9833  Resolvase Protein  50 
 
 
210 aa  43.1  0.001  Agrobacterium vitis S4  Bacteria  n/a    n/a   
 
 
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